Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61511 | Soybean | cytosol | 77.71 | 79.43 |
| CDY32779 | Canola | cytosol, mitochondrion, nucleus | 15.17 | 77.78 |
| KRH52203 | Soybean | cytosol, mitochondrion, peroxisome | 77.09 | 77.57 |
| Bra002816.1-P | Field mustard | cytosol | 74.3 | 74.3 |
| AT5G56450.1 | Thale cress | cytosol | 74.3 | 72.73 |
| GSMUA_Achr6P35840_001 | Banana | cytosol | 70.28 | 71.84 |
| GSMUA_Achr4P00870_001 | Banana | cytosol | 68.73 | 69.59 |
| TraesCS1A01G360400.1 | Wheat | peroxisome | 67.49 | 68.77 |
| TraesCS1B01G376900.1 | Wheat | peroxisome | 67.8 | 68.22 |
| Zm00001d038850_P001 | Maize | peroxisome | 68.11 | 67.07 |
| HORVU1Hr1G080040.1 | Barley | peroxisome | 66.56 | 66.98 |
| TraesCS1D01G364800.1 | Wheat | peroxisome | 67.49 | 66.67 |
| KXG22430 | Sorghum | peroxisome | 67.8 | 66.57 |
| CDY47751 | Canola | nucleus, plastid | 47.37 | 61.69 |
| Solyc08g063010.2.1 | Tomato | endoplasmic reticulum, vacuole | 55.11 | 57.98 |
| CDY20722 | Canola | mitochondrion | 27.55 | 57.42 |
| Bra039633.1-P | Field mustard | cytosol | 26.93 | 56.13 |
| Bra039632.1-P | Field mustard | cytosol, mitochondrion, nucleus | 26.93 | 48.6 |
| Os05t0539600-01 | Rice | cytosol, mitochondrion, plastid | 24.15 | 45.61 |
| CDY32780 | Canola | cytosol | 18.89 | 44.2 |
| VIT_17s0000g04970.t01 | Wine grape | mitochondrion | 34.06 | 35.48 |
| VIT_19s0177g00370.t01 | Wine grape | cytosol, mitochondrion | 15.48 | 35.21 |
| VIT_06s0004g01910.t01 | Wine grape | cytosol, mitochondrion, plastid | 38.39 | 31.55 |
| VIT_12s0028g03380.t01 | Wine grape | plastid | 36.53 | 30.81 |
| VIT_13s0064g01050.t01 | Wine grape | cytosol | 37.15 | 25.16 |
| VIT_10s0116g01120.t01 | Wine grape | plastid | 7.74 | 17.01 |
| VIT_00s1209g00010.t01 | Wine grape | cytosol, plastid | 7.74 | 16.34 |
| VIT_03s0038g00080.t01 | Wine grape | plastid | 8.05 | 14.05 |
| VIT_16s0039g00600.t01 | Wine grape | cytosol | 10.53 | 13.65 |
Protein Annotations
| Gene3D:1.50.40.10 | EntrezGene:100266251 | wikigene:100266251 | MapMan:24.2.13 | InterPro:Aden_trnslctor | ProteinID:CBI20651 |
| ProteinID:CBI20651.3 | UniProt:D7STQ2 | EMBL:FN595231 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005347 | GO:GO:0005471 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0015866 | GO:GO:0015867 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0022857 | GO:GO:0046902 | GO:GO:0048653 | GO:GO:0055085 | InterPro:IPR018108 |
| InterPro:IPR023395 | EntrezGene:LOC100266251 | wikigene:LOC100266251 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00927 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF637 |
| SUPFAM:SSF103506 | UniParc:UPI00015C8A61 | ArrayExpress:VIT_04s0008g01130 | EnsemblPlantsGene:VIT_04s0008g01130 | EnsemblPlants:VIT_04s0008g01130.t01 | RefSeq:XP_002279110 |
| RefSeq:XP_002279110.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:935801..939104
Molecular Weight (calculated)
35941.6 Da
IEP (calculated)
9.861
GRAVY (calculated)
-0.099
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEEGDEGD LRSRTRASGP PKWLTSFQKD LTAGAVMGGV VHTIVAPIER AKLLLQTQES NVAIIAGRHR RFKGMCDCIV RTVREEGILS LWRGNGSSVL
101: RYYPSVALNF SLKDLYKNML RCSNSLDGHV TYGVSANFIA GAAAGCTTLI IIYPLDIAHT RLAADVGKTE ARQFRGIYHF LNTILKKDGI QGIYRGLPAS
201: LHGMVVHRGL YFGGFDTIKE MLSEESKPEL ALWKRWAAAQ AVTTSAGLLS YPLDTVRRRM MMQSGLERPM YRSTLECWRT IYRTEGVASF YRGAVSNMFR
301: STGGAAILVL YDEVKKFMNW SGF
101: RYYPSVALNF SLKDLYKNML RCSNSLDGHV TYGVSANFIA GAAAGCTTLI IIYPLDIAHT RLAADVGKTE ARQFRGIYHF LNTILKKDGI QGIYRGLPAS
201: LHGMVVHRGL YFGGFDTIKE MLSEESKPEL ALWKRWAAAQ AVTTSAGLLS YPLDTVRRRM MMQSGLERPM YRSTLECWRT IYRTEGVASF YRGAVSNMFR
301: STGGAAILVL YDEVKKFMNW SGF
001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI
Arabidopsis Description
Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.