Factsheet for Os05t0539600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04954	Soybean	cytosol	33.92	50.43
KXG22430	Sorghum	peroxisome	68.42	35.56
Zm00001d038850_P001	Maize	peroxisome	67.25	35.06
CDY32780	Canola	cytosol	26.9	33.33
TraesCS1D01G364800.1	Wheat	peroxisome	61.4	32.11
TraesCS1B01G376900.1	Wheat	peroxisome	60.23	32.09
HORVU1Hr1G080040.1	Barley	peroxisome	59.65	31.78
TraesCS1A01G360400.1	Wheat	peroxisome	58.48	31.55
Solyc08g063030.2.1	Tomato	cytosol	42.11	28.92
GSMUA_Achr6P35840_001	Banana	cytosol	52.05	28.16
GSMUA_Achr4P00870_001	Banana	cytosol	47.95	25.71
VIT_04s0008g01130.t01	Wine grape	cytosol	45.61	24.15
Bra002816.1-P	Field mustard	cytosol	43.27	22.91
AT5G56450.1	Thale cress	cytosol	43.86	22.73
CDY47751	Canola	nucleus, plastid	23.98	16.53
Os02t0718900-01	Rice	mitochondrion	32.16	14.4
Os11t0661300-01	Rice	mitochondrion	26.9	13.98
Os05t0302700-01	Rice	mitochondrion	29.82	13.42
CDY20722	Canola	mitochondrion	7.6	8.39
Bra039633.1-P	Field mustard	cytosol	7.6	8.39
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	7.6	7.26
CDY32779	Canola	cytosol, mitochondrion, nucleus	0.58	1.59

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	ProteinID:BAH93233.1	ProteinID:BAS95104.1	UniProt:C7J2J9
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	EnsemblPlantsGene:Os05g0539600	EnsemblPlants:Os05t0539600-01	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506	UniParc:UPI0001B66004	SEG:seg

Description

Mitochondrial substrate carrier family protein. (Os05t0539600-01)

Coordinates

chr5:+:26805817..26809069

Molecular Weight (calculated)

18170.9 Da

IEP (calculated)

10.341

GRAVY (calculated)

0.006

Length

171 amino acids

Sequence
(BLAST)

001: MSEEAAAAAA AAGAAGVEES LGRRRSRRGG GGDGVGMGAA AAARVWEFER DLVAGAAMGG AVHTVVAPIE RAKLLLQTQD GNAALLGRAR RFRGFADCVA
101: RTVRDEGVLS LWRGNGTAVI RYYPSVALNF SLKVPTPTPK PPRHFCSYCL FVPCCPSYRF VRYNRINIAS V

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.