Factsheet for Bra002816.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32779	Canola	cytosol, mitochondrion, nucleus	19.5	100.0
AT5G56450.1	Thale cress	cytosol	89.47	87.58
CDY47751	Canola	nucleus, plastid	64.4	83.87
KRH61511	Soybean	cytosol	72.76	74.37
VIT_04s0008g01130.t01	Wine grape	cytosol	74.3	74.3
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	73.68	74.14
GSMUA_Achr6P35840_001	Banana	cytosol	67.49	68.99
GSMUA_Achr4P00870_001	Banana	cytosol	66.87	67.71
TraesCS1A01G360400.1	Wheat	peroxisome	64.71	65.93
TraesCS1B01G376900.1	Wheat	peroxisome	64.71	65.11
Bra039633.1-P	Field mustard	cytosol	30.96	64.52
HORVU1Hr1G080040.1	Barley	peroxisome	63.78	64.17
TraesCS1D01G364800.1	Wheat	peroxisome	64.71	63.91
KXG22430	Sorghum	peroxisome	65.02	63.83
Zm00001d038850_P001	Maize	peroxisome	64.71	63.72
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	30.96	55.87
CDY32780	Canola	cytosol	23.84	55.8
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	52.01	54.72
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	22.91	43.27
Bra023616.1-P	Field mustard	cytosol, mitochondrion, plastid	31.89	33.55
Bra010369.1-P	Field mustard	plastid	38.39	32.89
Bra019626.1-P	Field mustard	cytosol	27.55	32.01
Bra008826.1-P	Field mustard	mitochondrion, plastid	36.22	31.37
Bra006203.1-P	Field mustard	plastid	35.91	30.77
Bra013981.1-P	Field mustard	plastid	33.13	29.8

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	EnsemblPlantsGene:Bra002816	EnsemblPlants:Bra002816.1	EnsemblPlants:Bra002816.1-P
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M4CF34	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	SUPFAM:SSF103506	UniParc:UPI0002544A20	:	:

Description

AT5G56450 (E=5e-162) | mitochondrial substrate carrier family protein

Coordinates

chrA10:+:7391156..7392127

Molecular Weight (calculated)

35844.3 Da

IEP (calculated)

10.418

GRAVY (calculated)

-0.089

Length

323 amino acids

Sequence
(BLAST)

001: MGIQEDPGAH SSTRRNPSSL PQTLKHFHRD LLAGAVMGGV VHTIVAPIER AKLLLQTQES NIAIVGDSSG KRRFKGMFDF IHRTVREEGV LSLWRGNGSS
101: VLRYYPSVAL NFSLKDLYRN ILRNSSSQES HVFSGALANF IAGSAAGCTA LIVVYPLDIA HTRLAADVGK KEARQFRGIH HFLTTVQRKD GVRGIYRGLP
201: ASLHGVIVHR GLYFGGFDTV KEVLSEDKEL ALWKRWVLAQ GVTTSAGLAS YPLDTVRRRI MMQSGIEHPM YSSTLDCWKK IYRVEGLASF YRGALSNMFR
301: STGSAAILVF YDEVKKFLNW GGI

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.