CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038850_P001	Maize	peroxisome	98.18	98.48
TraesCS1A01G360400.1	Wheat	peroxisome	86.02	89.27
TraesCS1B01G376900.1	Wheat	peroxisome	86.93	89.1
HORVU1Hr1G080040.1	Barley	peroxisome	86.02	88.16
TraesCS1D01G364800.1	Wheat	peroxisome	86.93	87.46
GSMUA_Achr6P35840_001	Banana	cytosol	73.56	76.58
CDY32779	Canola	cytosol, mitochondrion, nucleus	14.59	76.19
GSMUA_Achr4P00870_001	Banana	cytosol	70.52	72.73
KRH61511	Soybean	cytosol	68.39	71.2
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	67.17	68.85
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	35.56	68.42
VIT_04s0008g01130.t01	Wine grape	cytosol	66.57	67.8
Bra002816.1-P	Field mustard	cytosol	63.83	65.02
AT5G56450.1	Thale cress	cytosol	63.83	63.64
CDY47751	Canola	nucleus, plastid	42.55	56.45
CDY20722	Canola	mitochondrion	24.92	52.9
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	48.33	51.79
Bra039633.1-P	Field mustard	cytosol	24.32	51.61
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	24.62	45.25
CDY32780	Canola	cytosol	15.81	37.68
KXG19896	Sorghum	mitochondrion	39.82	36.29
EER95589	Sorghum	plastid	37.99	32.89
EES04810	Sorghum	cytosol, mitochondrion, plastid	31.31	31.31
KXG30875	Sorghum	plastid	36.78	31.27

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1B6P9K7	InterPro:Aden_trnslctor	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0048653
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG22430	ProteinID:KXG22430	ProteinID:KXG22430.1
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	EnsemblPlantsGene:SORBI_3009G213400	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI00081ABDCE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:55893550..55896259

Molecular Weight (calculated)

36476.3 Da

IEP (calculated)

10.395

GRAVY (calculated)

-0.057

Length

329 amino acids

Sequence
(BLAST)

001: MSEEAAARAG VEESIGQRRR RDGRGEAAAA GRVWEFERDL VAGALMGGAV HTVVAPIERV KLLLQTQDGN AALLGRARRF RGFADCVART VRDEGVLSLW
101: RGNGTAVIRY YPSVALNFSL KDLYRSILKD AGTSSDNKFT SIALSNFLAG AAAGCTTLVL IYPLDIAHTR LAADIGCTDT RQFRGIRHFI QTVYKKNGIR
201: GIYRGLPASL HGMVVHRGLY FGGFDTAKDV LVPLESPLWQ RWVAAQAVTS MAGLISYPLD TVRRRMMMQS GMEVQMYSST LDCWRKIYRL EGIRSFYRGA
301: LSNMFRSTGA ATILVLYDEV KKFMDRGRL

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.