CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051685_P002	Maize	plastid	97.42	97.42
Zm00001d017857_P002	Maize	plastid	96.9	96.4
GSMUA_Achr1P19560_001	Banana	cytosol	6.46	96.15
Os02t0718900-01	Rice	mitochondrion	91.21	92.41
TraesCS6A01G282200.1	Wheat	plastid	89.15	90.79
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	88.89	90.53
HORVU6Hr1G070780.1	Barley	plastid	88.63	90.26
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	62.27	90.26
TraesCS6B01G310600.1	Wheat	plastid	88.89	87.98
GSMUA_Achr3P11040_001	Banana	mitochondrion	78.04	82.74
Solyc01g087070.2.1	Tomato	unclear	73.64	82.37
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	80.88	80.05
GSMUA_Achr9P19840_001	Banana	mitochondrion	23.26	79.65
AT3G08580.2	Thale cress	mitochondrion, plastid	78.29	79.53
KRH43521	Soybean	cytosol, mitochondrion, plastid	79.33	79.12
KRH13934	Soybean	mitochondrion	79.33	78.92
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	28.94	78.87
CDX70507	Canola	plastid	76.49	78.51
KRH20834	Soybean	mitochondrion	74.68	78.32
CDX78525	Canola	plastid	76.23	78.25
Bra006203.1-P	Field mustard	plastid	76.23	78.25
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	79.07	77.86
PGSC0003DMT400017550	Potato	cytosol, mitochondrion, plastid	75.97	77.78
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	77.26	77.66
CDX91117	Canola	plastid	75.97	77.17
CDX69638	Canola	mitochondrion, plastid	74.16	77.15
CDY09801	Canola	plastid	75.71	77.11
EER95589	Sorghum	plastid	75.45	76.84
Bra008826.1-P	Field mustard	mitochondrion, plastid	73.13	75.87
KXG19896	Sorghum	mitochondrion	67.44	72.3
GSMUA_Achr10P...	Banana	unclear	81.14	69.62
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	24.81	65.75
VIT_13s0064g01050.t01	Wine grape	cytosol	78.04	63.31
GSMUA_Achr1P19540_001	Banana	extracellular	13.18	55.43
EES04810	Sorghum	cytosol, mitochondrion, plastid	47.03	55.32
CDX85645	Canola	plastid	75.71	42.1
KXG22430	Sorghum	peroxisome	31.27	36.78

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A194YRR0	InterPro:Aden_trnslctor	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG30875	ProteinID:KXG30875	ProteinID:KXG30875.1	ProteinID:KXG30876.1
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	EnsemblPlantsGene:SORBI_3004G259200	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI0001C80BD7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:60460359..60464051

Molecular Weight (calculated)

42256.9 Da

IEP (calculated)

10.336

GRAVY (calculated)

-0.117

Length

387 amino acids

Sequence
(BLAST)

001: MADQANQPTV LHKLGGQFHL SSSFSEGVRA RNICPSVSSY ERSFATRNYM TQSLFSPSMS VTGGINVPVM RTPLFANAPA EKGGKNFMID FMMGGVSAAV
101: SKTAAAPIER VKLLIQNQDE MIKSGRLSEP YKGIGDCFKR TIKDEGFSSL WRGNTANVIR YFPTQALNFA FKDYFKRLFN FKKDKDGYWK WFAGNLASGG
201: AAGASSLFFV YSLDYARTRL ANDAKAAKGG GDRQFNGLVD VYRKTLKSDG IAGLYRGFNI SCVGIIVYRG LYFGLYDSIK PVVLTGNLQD NFFASFALGW
301: LITNGAGLAS YPIDTVRRRM MMTSGEAVKY KSSLDAFQQI LKKEGPKSLF KGAGANILRA IAGAGVLSGY DQLQILFFGK KYGSGGA

Best Arabidopsis Sequence Match ( AT5G13490.1 )
(BLAST)

001: MVEQTQHPTI LQKVSGQLLS SSVSQDIRGY ASASKRPATY QKHAAYGNYS NAAFQYPLVA ASQIATTTSP VFVQAPGEKG FTNFAIDFMM GGVSAAVSKT
101: AAAPIERVKL LIQNQDEMLK AGRLTEPYKG IRDCFGRTIR DEGIGSLWRG NTANVIRYFP TQALNFAFKD YFKRLFNFKK DKDGYWKWFA GNLASGGAAG
201: ASSLLFVYSL DYARTRLAND SKSAKKGGGE RQFNGLVDVY KKTLKSDGIA GLYRGFNISC AGIIVYRGLY FGLYDSVKPV LLTGDLQDSF FASFALGWLI
301: TNGAGLASYP IDTVRRRMMM TSGEAVKYKS SFDAFSQIVK KEGAKSLFKG AGANILRAVA GAGVLAGYDK LQLIVFGKKY GSGGA

Arabidopsis Description

AAC2AAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF67]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.