CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027468_P001	Maize	plastid	98.68	98.68
Os05t0302700-01	Rice	mitochondrion	87.37	87.37
HORVU7Hr1G042790.1	Barley	plasma membrane	77.63	78.04
TraesCS7B01G116600.1	Wheat	cytosol, mitochondrion, plastid	77.63	77.84
TraesCS7A01G209800.1	Wheat	mitochondrion, plastid	77.11	77.51
KXG30875	Sorghum	plastid	76.84	75.45
TraesCS7D01G211700.2	Wheat	mitochondrion, plastid	73.42	73.42
KXG19896	Sorghum	mitochondrion	66.32	69.81
EES04810	Sorghum	cytosol, mitochondrion, plastid	47.11	54.41
KXG22430	Sorghum	peroxisome	32.89	37.99

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8061445	InterPro:Aden_trnslctor	UniProt:C5WZZ8	EnsemblPlants:EER95589
ProteinID:EER95589	ProteinID:EER95589.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0022857	GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	EnsemblPlantsGene:SORBI_3001G522000	SUPFAM:SSF103506	unigene:Sbi.1393
TMHMM:TMhelix	UniParc:UPI0001A831CA	RefSeq:XP_002468591.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:78708589..78712511

Molecular Weight (calculated)

41329.0 Da

IEP (calculated)

10.255

GRAVY (calculated)

-0.017

Length

380 amino acids

Sequence
(BLAST)

001: MADELRSTSV VQKVHGQSVL LSRISSYSAM NNPVFNNAYS AYNVPQRSYY GMNATVGLSS VMAPSPVFAS APKEKGFSGF MIDFMMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMLKTGRL SEPYKGIGDC FGRTIRDEGF VSLWRGNTAN VIRYFPTQAL NFAFKDHFKR MFNFKKDKDG YWKWFAGNLA SGGAAGACSL
201: FFVYSLDYAR TRLANDAKAA KKGGERQFNG LVDVYRKTLA SDGIRGLYRG FNISCVGIIV YRGLYFGMYD SLKPVLLVGT LQDNFLASFL LGWGITIGAG
301: LASYPIDTVR RRMMMTSGEA VKYNSSLDAF KQIVAKEGTK SLFKGAGANI LRAVAGAGVL AGYDKLQVIV FGKKYGSGGG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.