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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 1
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
 vacuole: 18557835
mitochondrion: 19010998
mitochondrion: 20720170
plastid: 21433289
mitochondrion: 23027867
nucleus: 26035336
plasma membrane: 27800704
plastid: 27992503
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 26035336 doi
M Li, X Yin, K Sakata, P Yang, S Komatsu
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID: 20720170 doi
NL Taylor, KA Howell, JL Heazlewood, TY Tan, R Narsai, S Huang, J Whelan, AH Millar
Australian Research Council Centre of Excellence for Plant Energy Biology, University of Western Australia, Crawley, Western Australia, Australia.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027468_P001 Maize plastid 87.63 87.63
EER95589 Sorghum plastid 87.37 87.37
TraesCS7B01G116600.1 Wheat cytosol, mitochondrion, plastid 77.89 78.1
HORVU7Hr1G042790.1 Barley plasma membrane 77.37 77.78
TraesCS7A01G209800.1 Wheat mitochondrion, plastid 77.37 77.78
Os02t0718900-01 Rice mitochondrion 78.16 77.75
TraesCS7D01G211700.2 Wheat mitochondrion, plastid 73.95 73.95
Os11t0661300-01 Rice mitochondrion 48.68 56.23
Os05t0539600-01 Rice cytosol, mitochondrion, plastid 13.42 29.82
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13EntrezGene:4338353EMBL:AK061642InterPro:Aden_trnslctorProteinID:BAF17053.1
ProteinID:BAS93239.1ProteinID:EEE63157.1GO:GO:0003674GO:GO:0005215GO:GO:0005471GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006810
GO:GO:0008150GO:GO:0009987GO:GO:0015866GO:GO:0015867GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0022857GO:GO:0046902GO:GO:0055085InterPro:IPR018108InterPro:IPR023395
InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfEnsemblPlantsGene:Os05g0302700EnsemblPlants:Os05t0302700-01PFAM:PF00153
PRINTS:PR00926PRINTS:PR00927PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF645UniProt:Q0DJC0
SUPFAM:SSF103506TMHMM:TMhelixUniParc:UPI0000E1241ERefSeq:XP_015640040.1SEG:seg:
Description
Similar to ATP/ADP carrier protein. (Os05t0302700-01)
Coordinates
chr5:-:13610642..13614124
Molecular Weight (calculated)
40979.7 Da
IEP (calculated)
10.243
GRAVY (calculated)
0.006
Length
380 amino acids
Sequence
(BLAST)
001: MADDLGPPTV LQKIHGQSMM FSKISPYSLM KNPALYNANT SYSVPLKSYN GMDGNNGFSS VTSVSPVFAS APKEKGLSGF MIDFMMGGVS AAVSKTAAAP
101: IERIKLLIQN QDEMIKSGRL SHPYKGIADC FGRTIKDEGV IALWRGNTAN VIRYFPTQAL NFAFKDHFKR MFNFKKDKDG YWKWFAGNLA SGGAAGACSL
201: FFVYSLDYAR TRLANDAKAA KKGGGRQFNG LVDVYRKTLA SDGIAGLYRG FNISCVGIIV YRGLYFGMYD SLKPVVLVGN LQDNFLASFL LGWGITIGAG
301: LASYPIDTVR RRMMMTSGEA VKYNSSLDAF KQIVAKEGAK SLFKGAGANI LRAVAGAGVL AGYDKLQVVV FGKKYGSGGG
Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)
001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG
Arabidopsis Description
AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.