Factsheet for HORVU7Hr1G042790.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G209800.1	Wheat	mitochondrion, plastid	96.83	96.83
TraesCS7B01G116600.1	Wheat	cytosol, mitochondrion, plastid	95.5	95.25
TraesCS7D01G211700.2	Wheat	mitochondrion, plastid	90.21	89.74
EER95589	Sorghum	plastid	78.04	77.63
Zm00001d027468_P001	Maize	plastid	78.04	77.63
Os05t0302700-01	Rice	mitochondrion	77.78	77.37
HORVU6Hr1G070780.1	Barley	plastid	72.22	71.84
HORVU3Hr1G004820.22	Barley	mitochondrion	48.15	44.39
HORVU1Hr1G080040.1	Barley	peroxisome	31.22	36.76

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:HORVU7Hr1G042790
EnsemblPlants:HORVU7Hr1G042790.1	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0Y8I0	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI000294D863	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:125587207..125599381

Molecular Weight (calculated)

41341.2 Da

IEP (calculated)

10.422

GRAVY (calculated)

-0.064

Length

378 amino acids

Sequence
(BLAST)

001: MDELRPPSVV QKLHGQSMLL RQISSFAMRS PVIDNAHFAR NFSVTKYHQT NGSIGRLPLN TPSPMRAPAP EEKGFSGFMI DFLMGGVSAA VSKTAAAPIE
101: RVKLLIQNQD EMIKSGRLSH PYKSIGDCFS RTIKDEGVVA LWRGNTANVI RYFPTQALNF AFKDHFKRMF NFRKDKDGYW KWFFGNIASG GAAGASSLLF
201: VYSLDYARTR LANDAKAAKV GGQRQFDGIV DVYRKTLASD GVRGLYRGFN VSCVGIIVYR GLYFGMYDSL KPAVLVGSLE DNLLASFLLG WGVTMGAGLA
301: SYPIDTVRRR MMMTSGESVK YKNSMDAFKK IVAEEGAKSL FKGAGANILR AVAGAGVLAV YDKLQVVVFG KKYGSGGG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.