Factsheet for HORVU6Hr1G070780.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	98.16	98.16
TraesCS6A01G282200.1	Wheat	plastid	97.63	97.63
GSMUA_Achr1P19560_001	Banana	cytosol	6.58	96.15
TraesCS6B01G310600.1	Wheat	plastid	97.37	94.63
Os02t0718900-01	Rice	mitochondrion	92.63	92.15
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	63.95	91.01
KXG30875	Sorghum	plastid	90.26	88.63
Zm00001d051685_P002	Maize	plastid	89.47	87.86
Zm00001d017857_P002	Maize	plastid	89.21	87.15
GSMUA_Achr3P11040_001	Banana	mitochondrion	80.26	83.56
Solyc01g087070.2.1	Tomato	unclear	74.47	81.79
GSMUA_Achr9P19840_001	Banana	mitochondrion	24.21	81.42
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	82.11	79.8
AT3G08580.2	Thale cress	mitochondrion, plastid	80.0	79.79
KRH20834	Soybean	mitochondrion	76.05	78.32
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	29.21	78.17
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	80.53	77.86
CDX70507	Canola	plastid	77.11	77.72
CDX78525	Canola	plastid	76.84	77.45
Bra006203.1-P	Field mustard	plastid	76.84	77.45
KRH13934	Soybean	mitochondrion	78.95	77.12
KRH43521	Soybean	cytosol, mitochondrion, plastid	78.68	77.06
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	77.89	76.88
CDX91117	Canola	plastid	76.84	76.64
CDX69638	Canola	mitochondrion, plastid	75.0	76.61
PGSC0003DMT400017550	Potato	cytosol, mitochondrion, plastid	76.05	76.45
CDY09801	Canola	plastid	76.32	76.32
Bra008826.1-P	Field mustard	mitochondrion, plastid	73.95	75.34
HORVU7Hr1G042790.1	Barley	plasma membrane	71.84	72.22
GSMUA_Achr10P...	Banana	unclear	83.16	70.07
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	24.74	64.38
VIT_13s0064g01050.t01	Wine grape	cytosol	78.16	62.26
GSMUA_Achr1P19540_001	Banana	extracellular	13.42	55.43
HORVU3Hr1G004820.22	Barley	mitochondrion	48.68	45.12
CDX85645	Canola	plastid	76.84	41.95
HORVU1Hr1G080040.1	Barley	peroxisome	30.79	36.45

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:HORVU6Hr1G070780
EnsemblPlants:HORVU6Hr1G070780.1	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0WZI8	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0002952EAA	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:493224340..493227691

Molecular Weight (calculated)

41416.8 Da

IEP (calculated)

10.348

GRAVY (calculated)

-0.129

Length

380 amino acids

Sequence
(BLAST)

001: MADRANHPSV MQKFGGQFHL SSSFSEGVRA RNICPSVPSY ERRFTTSSYM TQSLGIRAPM MSSSPLFANA PPEKKGAKNF AIDFLMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMIKAGRL SEPYKGIGDC FGRTIKEEGF GSLWRGNTAN VIRYFPTQAL NFAFKDYFKR MFNFKKDKDG YWKWFGGNLA SGGAAGASSL
201: FFVYSLDYAR TRLANDAKAS KGGGERQFNG LVDVYRKTLK SDGIAGLYRG FNISCVGIIV YRGLYFGLYD SLKPVLLTGT LQDNFFASFA LGWLITNGAG
301: LASYPIDTVR RRMMMTSGEA VKYKSSLDAF NQILAKEGAK SLFKGAGANI LRAIAGAGVL SGYDQLQILF FGKKYGSGGA

Best Arabidopsis Sequence Match ( AT5G13490.1 )
(BLAST)

001: MVEQTQHPTI LQKVSGQLLS SSVSQDIRGY ASASKRPATY QKHAAYGNYS NAAFQYPLVA ASQIATTTSP VFVQAPGEKG FTNFAIDFMM GGVSAAVSKT
101: AAAPIERVKL LIQNQDEMLK AGRLTEPYKG IRDCFGRTIR DEGIGSLWRG NTANVIRYFP TQALNFAFKD YFKRLFNFKK DKDGYWKWFA GNLASGGAAG
201: ASSLLFVYSL DYARTRLAND SKSAKKGGGE RQFNGLVDVY KKTLKSDGIA GLYRGFNISC AGIIVYRGLY FGLYDSVKPV LLTGDLQDSF FASFALGWLI
301: TNGAGLASYP IDTVRRRMMM TSGEAVKYKS SFDAFSQIVK KEGAKSLFKG AGANILRAVA GAGVLAGYDK LQLIVFGKKY GSGGA

Arabidopsis Description

AAC2AAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF67]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.