CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91117	Canola	plastid	53.88	98.43
CDX70507	Canola	plastid	52.87	97.61
CDY09801	Canola	plastid	53.16	97.37
CDX78525	Canola	plastid	52.73	97.35
CDX69638	Canola	mitochondrion, plastid	51.87	97.04
GSMUA_Achr1P19560_001	Banana	cytosol	3.59	96.15
Bra008826.1-P	Field mustard	mitochondrion, plastid	51.29	95.71
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	34.2	89.14
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	47.84	86.49
Solyc01g087070.2.1	Tomato	unclear	41.67	83.81
KRH20834	Soybean	mitochondrion	43.68	82.38
GSMUA_Achr3P11040_001	Banana	mitochondrion	42.24	80.55
GSMUA_Achr9P19840_001	Banana	mitochondrion	13.07	80.53
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	45.4	80.41
KRH43521	Soybean	cytosol, mitochondrion, plastid	44.4	79.64
KRH13934	Soybean	mitochondrion	44.4	79.43
PGSC0003DMT400017550	Potato	cytosol, mitochondrion, plastid	42.96	79.1
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	15.8	77.46
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	42.24	77.37
Os02t0718900-01	Rice	mitochondrion	42.39	77.23
TraesCS6A01G282200.1	Wheat	plastid	42.1	77.11
HORVU6Hr1G070780.1	Barley	plastid	41.95	76.84
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	42.82	76.21
Zm00001d051685_P002	Maize	plastid	42.1	75.71
KXG30875	Sorghum	plastid	42.1	75.71
Zm00001d017857_P002	Maize	plastid	42.24	75.58
TraesCS6B01G310600.1	Wheat	plastid	42.39	75.45
CDY14242	Canola	plastid	40.8	75.33
CDX97439	Canola	plastid	40.66	75.07
GSMUA_Achr10P...	Banana	unclear	43.25	66.74
VIT_13s0064g01050.t01	Wine grape	cytosol	44.4	64.78
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	13.07	62.33
CDY02706	Canola	cytosol, mitochondrion, plastid	25.43	57.65
CDX85456	Canola	cytosol, mitochondrion, plastid	24.86	56.35
GSMUA_Achr1P19540_001	Banana	extracellular	7.33	55.43
CDY01045	Canola	golgi, mitochondrion, plastid	11.06	52.74
CDY58293	Canola	cytosol	20.83	52.16
CDX76233	Canola	mitochondrion, plastid	16.38	51.58
CDY38426	Canola	cytosol	25.29	48.48
CDY16928	Canola	mitochondrion, plastid	25.29	46.81
CDY42596	Canola	peroxisome	10.63	42.29
CDY01046	Canola	plastid	5.32	38.54
CDY20722	Canola	mitochondrion	7.18	32.26
CDY47751	Canola	nucleus, plastid	11.49	32.26
CDY32779	Canola	cytosol, mitochondrion, nucleus	2.87	31.75
CDY32780	Canola	cytosol	5.32	26.81

Protein Annotations

Gene3D:1.50.40.10	MapMan:18.1.2.1.1	MapMan:24.2.13	GO:A0A078D8X2	InterPro:Aden_trnslctor	EnsemblPlants:CDX85645
ProteinID:CDX85645	ProteinID:CDX85645.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00143377001	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR31485	PANTHER:PTHR31485:SF4	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EF494B
SEG:seg	:	:	:	:	:

Description

BnaA02g01680D

Coordinates

chrLK031842:-:992125..996407

Molecular Weight (calculated)

77345.3 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.173

Length

696 amino acids

Sequence
(BLAST)

001: MVEQTQQPSI FQKAASGQLM RSGVSQDIHG YASGFQRRAT YGNYSNAAFQ YPLAATSRIV ATTTASPVFV QAPSEKGFSS FAIDFLMGGV SAAVSKTAAA
101: PIERVKLLIQ NQDEMLKAGR LSEPYKGIGD CFGRTIKDEG FGSLWRGNTA NVIRYFPTQA LNFAFKDYFK RLFNFKKDRD GYWKWFAGNL GSGGAAGASS
201: LLFVYSLDYA RTRLANDSKA AKKGGERQFN GLVDVYKKTL KSDGIAGLYR GFNISCVGII VYRGLYFGLY DSLKPLLPAD LQDSFFASFA LGWLITNGAG
301: LASYPIDTVR RRMMMTSGEA VKYKSSMDAF QQILKKEGPK SLFKGAGANI LRAIAGAGVL SGYDKLQLLL LGKKYGSGSD ASPLLDPLPH RKAKTSSPLL
401: FHVAVTASDS LYNKWQCRIM YYWYKQKKAL PRSDMGGFTR ILHSGTTDNL MDEIPTFVVD PLSPGLDQGY VVLNRPWAFV QWLERATIKE DYVLMAEPDH
501: IFVNPLPNLA VGGSPAAFPF FYITPQKFKN IVRKYYPVEM GPVTNIDPIG SSPVIISKES LEKIAPTWMN LSLTMKQDSD TDKAFGWVLE MYGYAIASAL
601: HGVRHMLRRD LMLQPPWDLS TKAMFIIHYT YACDYNMKGE LTYGKTGEWR FDKRLYLRGP PPRNISMPPP GVPESVVTLV KMLNEATSNI PNWDTL

Best Arabidopsis Sequence Match ( AT5G13490.1 )
(BLAST)

001: MVEQTQHPTI LQKVSGQLLS SSVSQDIRGY ASASKRPATY QKHAAYGNYS NAAFQYPLVA ASQIATTTSP VFVQAPGEKG FTNFAIDFMM GGVSAAVSKT
101: AAAPIERVKL LIQNQDEMLK AGRLTEPYKG IRDCFGRTIR DEGIGSLWRG NTANVIRYFP TQALNFAFKD YFKRLFNFKK DKDGYWKWFA GNLASGGAAG
201: ASSLLFVYSL DYARTRLAND SKSAKKGGGE RQFNGLVDVY KKTLKSDGIA GLYRGFNISC AGIIVYRGLY FGLYDSVKPV LLTGDLQDSF FASFALGWLI
301: TNGAGLASYP IDTVRRRMMM TSGEAVKYKS SFDAFSQIVK KEGAKSLFKG AGANILRAVA GAGVLAGYDK LQLIVFGKKY GSGGA

Arabidopsis Description

AAC2AAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF67]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.