CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20722	Canola	mitochondrion	68.25	27.74
CDY47751	Canola	nucleus, plastid	100.0	25.4
Bra002816.1-P	Field mustard	cytosol	100.0	19.5
AT5G56450.1	Thale cress	cytosol	93.65	17.88
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	82.54	16.2
KRH61511	Soybean	cytosol	80.95	16.14
GSMUA_Achr4P00870_001	Banana	cytosol	77.78	15.36
TraesCS1B01G376900.1	Wheat	peroxisome	77.78	15.26
GSMUA_Achr6P35840_001	Banana	cytosol	76.19	15.19
VIT_04s0008g01130.t01	Wine grape	cytosol	77.78	15.17
TraesCS1A01G360400.1	Wheat	peroxisome	76.19	15.14
TraesCS1D01G364800.1	Wheat	peroxisome	77.78	14.98
Zm00001d038850_P001	Maize	peroxisome	77.78	14.94
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	71.43	14.66
HORVU1Hr1G080040.1	Barley	peroxisome	74.6	14.64
KXG22430	Sorghum	peroxisome	76.19	14.59
CDY01045	Canola	golgi, mitochondrion, plastid	23.81	10.27
CDY58293	Canola	cytosol	26.98	6.12
CDX69638	Canola	mitochondrion, plastid	31.75	5.38
CDX78525	Canola	plastid	31.75	5.31
CDX70507	Canola	plastid	31.75	5.31
CDY09801	Canola	plastid	31.75	5.26
CDX91117	Canola	plastid	31.75	5.25
CDY02706	Canola	cytosol, mitochondrion, plastid	25.4	5.21
CDX85456	Canola	cytosol, mitochondrion, plastid	25.4	5.21
CDX97439	Canola	plastid	30.16	5.04
CDY14242	Canola	plastid	30.16	5.04
CDY38426	Canola	cytosol	25.4	4.41
CDY16928	Canola	mitochondrion, plastid	25.4	4.26
CDX85645	Canola	plastid	31.75	2.87
CDY42596	Canola	peroxisome	4.76	1.71
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	1.59	0.58
CDY01046	Canola	plastid	0.0	0.0
CDY32780	Canola	cytosol	0.0	0.0
CDX76233	Canola	mitochondrion, plastid	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078H5N8	UniProt:A0A078H5N8	EnsemblPlants:CDY32779	ProteinID:CDY32779
ProteinID:CDY32779.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00052842001	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF637	SUPFAM:SSF103506	UniParc:UPI0004EE9045	:	:	:

Description

BnaA10g10700DBnaA10g10700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5N8]

Coordinates

chrLK032299:-:251083..251431

Molecular Weight (calculated)

7203.8 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.003

Length

63 amino acids

Sequence
(BLAST)

1: MMQSGIEHPM YSSTLDCWKK IYRVEGLASF YRGALSNMFR STGSAAILVF YDEVKKFLNW GGI

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.