Factsheet for Zm00001d038850_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22430	Sorghum	peroxisome	98.48	98.18
TraesCS1A01G360400.1	Wheat	peroxisome	86.28	89.27
TraesCS1B01G376900.1	Wheat	peroxisome	87.2	89.1
HORVU1Hr1G080040.1	Barley	peroxisome	86.28	88.16
TraesCS1D01G364800.1	Wheat	peroxisome	87.2	87.46
CDY32779	Canola	cytosol, mitochondrion, nucleus	14.94	77.78
GSMUA_Achr6P35840_001	Banana	cytosol	74.39	77.22
GSMUA_Achr4P00870_001	Banana	cytosol	71.04	73.04
KRH61511	Soybean	cytosol	69.21	71.84
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	67.99	69.47
VIT_04s0008g01130.t01	Wine grape	cytosol	67.07	68.11
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	35.06	67.25
Bra002816.1-P	Field mustard	cytosol	63.72	64.71
AT5G56450.1	Thale cress	cytosol	64.33	63.94
CDY47751	Canola	nucleus, plastid	42.68	56.45
CDY20722	Canola	mitochondrion	25.3	53.55
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	49.09	52.44
Bra039633.1-P	Field mustard	cytosol	24.7	52.26
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.0	45.81
CDY32780	Canola	cytosol	15.55	36.96
Zm00001d045884_P001	Maize	extracellular, plastid	38.72	34.7
Zm00001d027468_P001	Maize	plastid	38.11	32.89
Zm00001d051685_P002	Maize	plastid	37.5	31.78
Zm00001d017857_P002	Maize	plastid	36.89	31.11
Zm00001d016230_P001	Maize	cytosol	22.56	29.6

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1D6MBA8	ProteinID:AQK88052.1	InterPro:Aden_trnslctor	GO:GO:0000003
GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0009908	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0048653	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF637	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI000221FCE9	EnsemblPlantsGene:Zm00001d038850	EnsemblPlants:Zm00001d038850_P001
EnsemblPlants:Zm00001d038850_T001	SEG:seg	:	:	:	:

Description

Probable ADPATP carrier protein

Coordinates

chr6:+:165838014..165840784

Molecular Weight (calculated)

36448.3 Da

IEP (calculated)

10.535

GRAVY (calculated)

-0.076

Length

328 amino acids

Sequence
(BLAST)

001: MSEEAARAGV EESIGQRRRR DGRGEAAAAG RVWEFERDLV AGALMGGAVH TVVAPIERVK LLLQTQDGNA ALLGRARKFR GFADCVARTV RDEGVLSLWR
101: GNGTAVIRYY PSVALNFSLK DLYRSILKDA GTSSDNKFTS IALSNFFAGA AAGCTTLVLI YPLDIAHTRL AADIGRTDTR QFRGIRHFIQ TIYKKNGIRG
201: IYRGLPASLH GMVVHRGLYF GGFDTAKDVL VPLESPLWQR WVAAQAVTSM AGLISYPLDT VRRRMMMQSG MEVQMYSSTL DCWRKIYRLE GIRSFYRGAL
301: SNMFRSTGAA AILVLYDEVK KFMDRGRL

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.