Factsheet for Bra039632.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039633.1-P	Field mustard	cytosol	86.03	99.35
CDY20722	Canola	mitochondrion	84.92	98.06
Bra002816.1-P	Field mustard	cytosol	55.87	30.96
AT5G56450.1	Thale cress	cytosol	52.51	28.48
KRH61511	Soybean	cytosol	48.6	27.53
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	49.16	27.41
VIT_04s0008g01130.t01	Wine grape	cytosol	48.6	26.93
GSMUA_Achr6P35840_001	Banana	cytosol	46.93	26.58
TraesCS1A01G360400.1	Wheat	peroxisome	45.81	25.87
HORVU1Hr1G080040.1	Barley	peroxisome	46.37	25.86
TraesCS1B01G376900.1	Wheat	peroxisome	46.37	25.86
GSMUA_Achr4P00870_001	Banana	cytosol	45.81	25.71
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	43.58	25.41
TraesCS1D01G364800.1	Wheat	peroxisome	46.37	25.38
Zm00001d038850_P001	Maize	peroxisome	45.81	25.0
KXG22430	Sorghum	peroxisome	45.25	24.62
Bra008826.1-P	Field mustard	mitochondrion, plastid	26.82	12.87
Bra006203.1-P	Field mustard	plastid	26.82	12.73
Bra010369.1-P	Field mustard	plastid	26.26	12.47
Bra023616.1-P	Field mustard	cytosol, mitochondrion, plastid	21.23	12.38
Bra019626.1-P	Field mustard	cytosol	18.99	12.23
Bra013981.1-P	Field mustard	plastid	22.35	11.14
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	7.26	7.6

Protein Annotations

EnsemblPlants:Bra039632.1	EnsemblPlants:Bra039632.1-P	EnsemblPlantsGene:Bra039632	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF637	PFAM:PF00153	PFscan:PS50920	SEG:seg	SUPFAM:SSF103506	UniParc:UPI000253EA3C
UniProt:M4FEW0	MapMan:24.2.13	:	:	:	:

Description

AT5G56450 (E=1e-022) | mitochondrial substrate carrier family protein

Coordinates

chrScaffold000172:-:16808..18061

Molecular Weight (calculated)

20488.7 Da

IEP (calculated)

10.023

GRAVY (calculated)

-0.473

Length

179 amino acids

Sequence
(BLAST)

001: MPDRTKSRPT HVGISLKFRF LSEDLYRGLL RNSSTSREKN HHLFSEGLCF GGFDTVKEVL SEEDKELALW VRWVLAQGVT TFAGFASHPL DTVRRRIMMQ
101: SGIENPMYRS EGLASFYRGA LSNMFRSIGS AAILVLYDEV KKFLNWRGDL RGTREEIGRC DCRGCRDCKR LGTAGKERR

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.