Factsheet for TraesCS1B01G376900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G360400.1	Wheat	peroxisome	96.88	98.11
HORVU1Hr1G080040.1	Barley	peroxisome	95.95	95.95
TraesCS1D01G364800.1	Wheat	peroxisome	97.51	95.72
Zm00001d038850_P001	Maize	peroxisome	89.1	87.2
KXG22430	Sorghum	peroxisome	89.1	86.93
CDY32779	Canola	cytosol, mitochondrion, nucleus	15.26	77.78
GSMUA_Achr6P35840_001	Banana	cytosol	74.14	75.32
GSMUA_Achr4P00870_001	Banana	cytosol	71.65	72.1
KRH61511	Soybean	cytosol	69.16	70.25
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	68.22	68.22
VIT_04s0008g01130.t01	Wine grape	cytosol	68.22	67.8
Bra002816.1-P	Field mustard	cytosol	65.11	64.71
AT5G56450.1	Thale cress	cytosol	65.73	63.94
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	32.09	60.23
CDY47751	Canola	nucleus, plastid	43.3	56.05
CDY20722	Canola	mitochondrion	26.17	54.19
Bra039633.1-P	Field mustard	cytosol	25.55	52.9
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	50.16	52.44
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.86	46.37
CDY32780	Canola	cytosol	16.2	37.68
TraesCS3B01G050500.1	Wheat	mitochondrion	33.02	31.74
TraesCS7B01G116600.1	Wheat	cytosol, mitochondrion, plastid	37.38	31.66
TraesCS3B01G033100.1	Wheat	cytosol	33.02	31.64
TraesCS6B01G310600.1	Wheat	plastid	36.76	30.18

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	GO:GO:0000003	GO:GO:0003674	GO:GO:0005215
GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908
GO:GO:0016020	GO:GO:0022857	GO:GO:0048653	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	SUPFAM:SSF103506	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G376900
EnsemblPlants:TraesCS1B01G376900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:608528709..608532075

Molecular Weight (calculated)

34985.5 Da

IEP (calculated)

10.540

GRAVY (calculated)

0.033

Length

321 amino acids

Sequence
(BLAST)

001: MSEGAAAAAA RVAAEEDGAA RAGRAWAFRR DLAAGALMGG AVHTVVAPIE RVKLLLQTQD GNAALLGRSR RFRGFADCVA RTVRDEGVLS LWRGNGTAVI
101: RYYPSVALNF SLKDLYRSIL KDAGTSADNK FASIALTNFI AGAAAGCTTL VIIYPLDIAH TRLAADIGQT DARQFKGIRH FIQTIYKKNG IRGIYRGLPA
201: SLHGMVVHRG LYFGGFDTAK DMLVPLDSPL WQRWVAAQAV TSTAGLISYP LDTVRRRMMM QSGMEAQMYS GTLDCWRKIY RAEGVRSFYR GALSNMFRST
301: GAAAILVLYD EVKKFMNGGR L

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.