Factsheet for HORVU1Hr1G080040.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G360400.1	Wheat	peroxisome	95.95	97.16
TraesCS1B01G376900.1	Wheat	peroxisome	95.95	95.95
TraesCS1D01G364800.1	Wheat	peroxisome	96.88	95.11
Zm00001d038850_P001	Maize	peroxisome	88.16	86.28
KXG22430	Sorghum	peroxisome	88.16	86.02
GSMUA_Achr6P35840_001	Banana	cytosol	74.14	75.32
CDY32779	Canola	cytosol, mitochondrion, nucleus	14.64	74.6
GSMUA_Achr4P00870_001	Banana	cytosol	71.65	72.1
KRH61511	Soybean	cytosol	68.54	69.62
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	67.6	67.6
VIT_04s0008g01130.t01	Wine grape	cytosol	66.98	66.56
Bra002816.1-P	Field mustard	cytosol	64.17	63.78
AT5G56450.1	Thale cress	cytosol	64.8	63.03
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	31.78	59.65
CDY47751	Canola	nucleus, plastid	42.68	55.24
CDY20722	Canola	mitochondrion	26.17	54.19
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	50.78	53.09
Bra039633.1-P	Field mustard	cytosol	25.55	52.9
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.86	46.37
CDY32780	Canola	cytosol	16.2	37.68
HORVU7Hr1G042790.1	Barley	plasma membrane	36.76	31.22
HORVU6Hr1G070780.1	Barley	plastid	36.45	30.79
HORVU3Hr1G004820.22	Barley	mitochondrion	33.96	26.59

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A287GF85	InterPro:Aden_trnslctor	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0048653
GO:GO:0055085	EnsemblPlantsGene:HORVU1Hr1G080040	EnsemblPlants:HORVU1Hr1G080040.1	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	SUPFAM:SSF103506	UniParc:UPI000B462D82	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:524411024..524415083

Molecular Weight (calculated)

34998.3 Da

IEP (calculated)

10.236

GRAVY (calculated)

-0.016

Length

321 amino acids

Sequence
(BLAST)

001: MSEGAAAAAA AEEEDGAEAG RAGRAWAFKR DLAAGALMGG AVHTVVAPIE RVKLLLQTQD GNAALLGRSR RFRGFADCVA RTVRDEGVLS LWRGNGTAVI
101: RYYPSVALNF SLKDLYRSIL KDAGTSADNK FTSIALTNFI AGAAAGCTTL VIIYPLDIAH TRLAADIGQT DSRQFKGIRH FIQTIYKKNG IRGIYRGLPA
201: SLHGMVVHRG LYFGGFDTAK DTLVPLDSPL WQRWVTAQAV TSTAGLISYP LDTVRRRMMM QSGMEVQMYS GTFDCWRKIY KAEGVKSFYR GALSNMFRST
301: GAAAILVLYD EVKKFMNGGR L

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.