Factsheet for Solyc08g063010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 3
golgi 3
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32779	Canola	cytosol, mitochondrion, nucleus	14.66	71.43
VIT_04s0008g01130.t01	Wine grape	cytosol	57.98	55.11
KRH61511	Soybean	cytosol	56.03	54.43
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	56.03	53.58
GSMUA_Achr6P35840_001	Banana	cytosol	54.07	52.53
GSMUA_Achr4P00870_001	Banana	cytosol	54.07	52.04
Bra002816.1-P	Field mustard	cytosol	54.72	52.01
CDY20722	Canola	mitochondrion	26.06	51.61
TraesCS1A01G360400.1	Wheat	peroxisome	53.09	51.42
AT5G56450.1	Thale cress	cytosol	54.72	50.91
HORVU1Hr1G080040.1	Barley	peroxisome	53.09	50.78
Bra039633.1-P	Field mustard	cytosol	25.41	50.32
TraesCS1B01G376900.1	Wheat	peroxisome	52.44	50.16
TraesCS1D01G364800.1	Wheat	peroxisome	52.44	49.24
CDY47751	Canola	nucleus, plastid	39.74	49.19
Zm00001d038850_P001	Maize	peroxisome	52.44	49.09
KXG22430	Sorghum	peroxisome	51.79	48.33
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.41	43.58
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	24.43	23.96
Solyc01g087070.2.1	Tomato	unclear	26.38	23.41
Solyc11g062130.1.1	Tomato	plastid	28.01	22.28
Solyc07g053830.2.1	Tomato	plastid	27.36	21.93
Solyc11g062190.1.1	Tomato	nucleus	27.36	21.93
Solyc01g014210.1.1	Tomato	plastid	19.54	20.2
Solyc08g063030.2.1	Tomato	cytosol	14.01	17.27
CDY32780	Canola	cytosol	4.89	10.87

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0000003	GO:GO:0003674	GO:GO:0005215	GO:GO:0005347
GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908
GO:GO:0009987	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0046902	GO:GO:0048653	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4CL83	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	SUPFAM:SSF103506
EnsemblPlantsGene:Solyc08g063010.2	EnsemblPlants:Solyc08g063010.2.1	UniParc:UPI000276B4C5	:	:	:

Description

No Description!

Coordinates

chr8:-:52502741..52504427

Molecular Weight (calculated)

35196.4 Da

IEP (calculated)

9.484

GRAVY (calculated)

-0.073

Length

307 amino acids

Sequence
(BLAST)

001: MLLVLASKFL VTTLNDSYEN IFELAACFNF FSIFSLLESD SEGHRRMRSM NHFYNIKQAL QWLDSVLYKL TTIRRHLQPI SGLTEPTMSY ANVVVDNSDL
101: YRNILHSNFQ EGHFLAGSSA NFIAGSAAGC TTLVIIYPLD IAHTRLAADL GRYETRQFRG IYHFLRTIHE KDGIRGIYRG LPASLHGMIV HRGLYFGGFD
201: TIKDRMAENS ETEVPLWKRW FVAQAVTTSA GLFSYPLDTV RRRMMMQSGL EKPMYRSTFD CWRRIYKTEG FTSFYRGALS NIFRSAGAAA VLVLYDEVKK
301: FMNWSGL

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.