CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61511	Soybean	cytosol	94.39	95.89
CDY32779	Canola	cytosol, mitochondrion, nucleus	16.2	82.54
VIT_04s0008g01130.t01	Wine grape	cytosol	77.57	77.09
KRH04954	Soybean	cytosol	27.41	76.52
Bra002816.1-P	Field mustard	cytosol	74.14	73.68
AT5G56450.1	Thale cress	cytosol	75.7	73.64
GSMUA_Achr6P35840_001	Banana	cytosol	70.09	71.2
GSMUA_Achr4P00870_001	Banana	cytosol	68.85	69.28
TraesCS1A01G360400.1	Wheat	peroxisome	68.22	69.09
TraesCS1B01G376900.1	Wheat	peroxisome	68.22	68.22
Zm00001d038850_P001	Maize	peroxisome	69.47	67.99
HORVU1Hr1G080040.1	Barley	peroxisome	67.6	67.6
KXG22430	Sorghum	peroxisome	68.85	67.17
TraesCS1D01G364800.1	Wheat	peroxisome	68.22	66.97
CDY47751	Canola	nucleus, plastid	47.98	62.1
CDY20722	Canola	mitochondrion	27.73	57.42
Bra039633.1-P	Field mustard	cytosol	27.1	56.13
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	53.58	56.03
Bra039632.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.41	49.16
CDY32780	Canola	cytosol	19.31	44.93
KRH20836	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.86	36.73
KRH41838	Soybean	cytosol	30.84	31.53
KRH25624	Soybean	endoplasmic reticulum	36.14	31.27
KRH60537	Soybean	cytosol	30.53	31.21
KRH55930	Soybean	mitochondrion	36.14	31.18
KRH20834	Soybean	mitochondrion	35.83	31.17
KRH26962	Soybean	mitochondrion	35.51	31.06
KRH22368	Soybean	mitochondrion	35.51	31.06
KRH43521	Soybean	cytosol, mitochondrion, plastid	36.45	30.15
KRH13934	Soybean	mitochondrion	36.45	30.08
KRH23142	Soybean	cytosol, mitochondrion, plastid	36.14	29.37

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100807764	MapMan:24.2.13	EMBL:ACUP02003411	InterPro:Aden_trnslctor	EnsemblPlantsGene:GLYMA_06G052500
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	UniProt:I1K8D3	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH52203
ProteinID:KRH52203	ProteinID:KRH52203.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF637	SUPFAM:SSF103506
UniParc:UPI0002339D44	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:3955230..3960465

Molecular Weight (calculated)

35568.2 Da

IEP (calculated)

10.388

GRAVY (calculated)

-0.094

Length

321 amino acids

Sequence
(BLAST)

001: MSAADDDEPE RRRRLKASNS GGLKSFQRDL IAGAVMGGGV HTIVAPIERA KLLLQTQESN LAIVASGRRR FKGMLDCIAR TVREEGILSL WRGNGSSVIR
101: YYPSVALNFS LKDLYKSMLR GGNSSDNLLP GATANFAAGA AAGCTTLVMV YPLDIAHTRL AADIGRREVR QFRGIYHFLA TIFHKDGVRG IYKGLPASLH
201: GMVVHRGLYF GGFDTMKEIM SEESKPELAL WKRWVVAQAV TTSAGLISYP LDTVRRRMMM QSGIEQPVYN STLDCWRKIY RTEGLASFYR GAVSNVFRST
301: GAAAILVLYD EVKKFMNWGR I

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.