CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20834	Soybean	mitochondrion	77.43	47.43
KRH22368	Soybean	mitochondrion	73.45	45.23
KRH25624	Soybean	endoplasmic reticulum	73.89	45.01
KRH26962	Soybean	mitochondrion	73.01	44.96
KRH55930	Soybean	mitochondrion	73.89	44.89
KRH43521	Soybean	cytosol, mitochondrion, plastid	76.11	44.33
KRH13934	Soybean	mitochondrion	75.66	43.96
KRH23142	Soybean	cytosol, mitochondrion, plastid	70.8	40.51
KRH60537	Soybean	cytosol	52.21	37.58
KRH41838	Soybean	cytosol	51.77	37.26
KRH04954	Soybean	cytosol	14.6	28.7
KRH61511	Soybean	cytosol	38.05	27.22
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	36.73	25.86

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A0R0H3N5	EMBL:ACUP02008314	InterPro:Aden_trnslctor	EnsemblPlantsGene:GLYMA_13G203600
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH20836	ProteinID:KRH20836
ProteinID:KRH20836.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI0006ED72A6	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:31753843..31756013

Molecular Weight (calculated)

24680.8 Da

IEP (calculated)

9.140

GRAVY (calculated)

0.158

Length

226 amino acids

Sequence
(BLAST)

001: MCAISAVVSV TAAAPIARVK LLIQNQNEII KVGRLYESYK GIGDCFKRTI QEEGVFSLWR GNTASVIRHV PAHDKDGYWK WFFGNLASGG AAGASSLLFI
101: YCLDYARTGL ANDVKKGGER QFNGLVDVYG KTYASDGIAG LYRGFNITCV GVFVYRGLFF GLYDSLRPAL LVGNFQLGSF ADFSIAFLAC CSARRRMMMT
201: SGEAVKYKSS MDAFAQILEN EGAKSL

Best Arabidopsis Sequence Match ( AT3G08580.1 )
(BLAST)

001: MVDQVQHPTI AQKAAGQFMR SSVSKDVQVG YQRPSMYQRH ATYGNYSNAA FQFPPTSRML ATTASPVFVQ TPGEKGFTNF ALDFLMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMIKAGRL SEPYKGIGDC FGRTIKDEGF GSLWRGNTAN VIRYFPTQAL NFAFKDYFKR LFNFKKDRDG YWKWFAGNLA SGGAAGASSL
201: LFVYSLDYAR TRLANDAKAA KKGGGGRQFD GLVDVYRKTL KTDGIAGLYR GFNISCVGII VYRGLYFGLY DSVKPVLLTG DLQDSFFASF ALGWVITNGA
301: GLASYPIDTV RRRMMMTSGE AVKYKSSLDA FKQILKNEGA KSLFKGAGAN ILRAVAGAGV LSGYDKLQLI VFGKKYGSGG A

Arabidopsis Description

AAC1AAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V544]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.