CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60537	Soybean	cytosol	97.77	97.77
VIT_17s0000g04970.t01	Wine grape	mitochondrion	78.66	79.68
CDY02706	Canola	cytosol, mitochondrion, plastid	73.89	75.57
AT5G17400.1	Thale cress	cytosol	73.25	75.16
CDX85456	Canola	cytosol, mitochondrion, plastid	73.25	74.92
Bra023616.1-P	Field mustard	cytosol, mitochondrion, plastid	73.25	74.92
GSMUA_Achr6P35660_001	Banana	cytosol	70.7	73.75
GSMUA_AchrUn_...	Banana	cytosol	69.43	73.65
CDY58293	Canola	cytosol	63.69	71.94
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	71.66	71.89
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	71.34	71.57
CDY01045	Canola	golgi, mitochondrion, plastid	33.12	71.23
Bra019626.1-P	Field mustard	cytosol	61.78	69.78
CDX76233	Canola	mitochondrion, plastid	47.77	67.87
Zm00001d016230_P001	Maize	cytosol	52.87	66.4
Os11t0661300-01	Rice	mitochondrion	68.15	65.05
TraesCS3B01G033100.1	Wheat	cytosol	69.11	64.78
TraesCS3D01G030800.1	Wheat	mitochondrion	68.79	64.67
TraesCS3B01G050500.1	Wheat	mitochondrion	68.79	64.67
TraesCS3A01G048500.1	Wheat	cytosol, plastid	68.79	64.29
EES04810	Sorghum	cytosol, mitochondrion, plastid	67.2	64.13
Bra013981.1-P	Field mustard	plastid	73.25	64.07
CDY38426	Canola	cytosol	73.25	63.36
CDY16928	Canola	mitochondrion, plastid	72.93	60.9
HORVU3Hr1G004820.22	Barley	mitochondrion	69.43	53.17
KRH20836	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.26	51.77
KRH25624	Soybean	endoplasmic reticulum	57.96	49.06
KRH26962	Soybean	mitochondrion	57.32	49.05
KRH22368	Soybean	mitochondrion	57.32	49.05
KRH55930	Soybean	mitochondrion	57.64	48.66
KRH20834	Soybean	mitochondrion	56.05	47.7
KRH13934	Soybean	mitochondrion	56.69	45.76
KRH43521	Soybean	cytosol, mitochondrion, plastid	56.37	45.62
KRH23142	Soybean	cytosol, mitochondrion, plastid	55.73	44.3
KRH61511	Soybean	cytosol	32.48	32.28
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	31.53	30.84
KRH04954	Soybean	cytosol	10.83	29.57

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100798418	MapMan:24.2.13	EMBL:ACUP02004781	InterPro:Aden_trnslctor	EnsemblPlantsGene:GLYMA_08G054100
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	UniProt:I1KQK5	InterPro:IPR018108	InterPro:IPR023395	ProteinID:KRH41835.1
ProteinID:KRH41836.1	ProteinID:KRH41837.1	EnsemblPlants:KRH41838	ProteinID:KRH41838	ProteinID:KRH41838.1	ProteinID:KRH41839.1
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF472	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0002338B55
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:4176471..4179982

Molecular Weight (calculated)

35280.0 Da

IEP (calculated)

10.353

GRAVY (calculated)

-0.041

Length

314 amino acids

Sequence
(BLAST)

001: MVKSTYEKFS KDFVMGGVAA IISKSAAAPI ERVKLLLQNQ GEMIKRGQLK KPYLGVSDGF KRVFMEEGLI AFWRGHQANI IRYFPTQAFN FAFKGYFKSI
101: FGYSKERDGY IKWFAGNVAS GSAAGATTSL LLYHLDYART RLGTDAIECR VTSQRQFKGL IDVYRKTLSS DGIAGLYRGF GISIWGITLY RGMYFGIYDT
201: MKPIVLVGPF EGKFLASFLL GWSITTFSGV CAYPFDTLRR RMMLTSGHPN KYCTAIHAFQ EIVRQEGFRA LFRGVTANML LGMAGAGVLA GYDQLNRISS
301: RHSHYNETNQ RVLK

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.