CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0539600-01	Rice	cytosol, mitochondrion, plastid	50.43	33.92
KRH61511	Soybean	cytosol	77.39	28.16
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	76.52	27.41
Solyc08g063030.2.1	Tomato	cytosol	58.26	26.91
KRH20836	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	28.7	14.6
KRH20834	Soybean	mitochondrion	35.65	11.11
KRH22368	Soybean	mitochondrion	34.78	10.9
KRH41838	Soybean	cytosol	29.57	10.83
KRH25624	Soybean	endoplasmic reticulum	34.78	10.78
KRH55930	Soybean	mitochondrion	34.78	10.75
KRH26962	Soybean	mitochondrion	33.91	10.63
KRH60537	Soybean	cytosol	28.7	10.51
KRH23142	Soybean	cytosol, mitochondrion, plastid	35.65	10.38
KRH43521	Soybean	cytosol, mitochondrion, plastid	34.78	10.31
KRH13934	Soybean	mitochondrion	34.78	10.28

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:ACUP02010647	InterPro:Aden_trnslctor	EnsemblPlantsGene:GLYMA_17G198200	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0015234	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0030974	GO:GO:0031305	GO:GO:0055085	GO:GO:0071934
InterPro:IPR018108	InterPro:IPR023395	UniProt:K7MMQ9	EnsemblPlants:KRH04954	ProteinID:KRH04954	ProteinID:KRH04954.1
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0002962B15

Description

hypothetical protein

Coordinates

chr17:+:31391088..31391435

Molecular Weight (calculated)

12744.7 Da

IEP (calculated)

9.959

GRAVY (calculated)

0.422

Length

115 amino acids

Sequence
(BLAST)

001: MAGAVMGGEV HTIMAPIERA KLLLQTQESN LTIVASGRLR FKGMLDCIAR TVREEGILSL WRGNGSSVIR YYPSVALNFS LKVVTLPLFF SIFFSFAYLV
101: MHQNQIPSSV VSANY

Best Arabidopsis Sequence Match ( AT5G56450.1 )
(BLAST)

001: MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR
101: GNGSSVLRYY PSVALNFSLK DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ FRGIHHFLST IHKKDGVRGI
201: YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG
301: ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Arabidopsis Description

Probable ADP,ATP carrier protein At5g56450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.