CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19560_001	Banana	cytosol	6.08	92.31
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	58.73	86.89
KRH20834	Soybean	mitochondrion	75.44	80.76
GSMUA_Achr9P19840_001	Banana	mitochondrion	22.53	78.76
KRH13934	Soybean	mitochondrion	77.22	78.41
KRH43521	Soybean	cytosol, mitochondrion, plastid	76.46	77.84
GSMUA_Achr3P11040_001	Banana	mitochondrion	71.65	77.53
KRH25624	Soybean	endoplasmic reticulum	72.41	77.09
KRH55930	Soybean	mitochondrion	72.41	76.88
KRH22368	Soybean	mitochondrion	70.38	75.75
KRH26962	Soybean	mitochondrion	70.13	75.48
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	73.92	74.68
KXG19896	Sorghum	mitochondrion	65.06	71.19
KRH20836	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	40.51	70.8
Zm00001d045884_P001	Maize	extracellular, plastid	64.56	69.67
GSMUA_Achr10P...	Banana	unclear	74.68	65.41
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	23.04	62.33
KRH41838	Soybean	cytosol	44.3	55.73
KRH60537	Soybean	cytosol	44.3	55.73
GSMUA_Achr1P19540_001	Banana	extracellular	12.66	54.35
KRH61511	Soybean	cytosol	29.87	37.34
KRH52203	Soybean	cytosol, mitochondrion, peroxisome	29.37	36.14
KRH04954	Soybean	cytosol	10.38	35.65

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100800843	MapMan:24.2.13	EMBL:ACUP02008457	InterPro:Aden_trnslctor	EnsemblPlantsGene:GLYMA_13G340500
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:K7M3H5	ProteinID:KRH23141.1
EnsemblPlants:KRH23142	ProteinID:KRH23142	ProteinID:KRH23142.1	ProteinID:KRH23143.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI000233AF72	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:43249783..43253050

Molecular Weight (calculated)

43049.0 Da

IEP (calculated)

10.370

GRAVY (calculated)

-0.072

Length

395 amino acids

Sequence
(BLAST)

001: MMVDKQRYPT IEQKLAGQLH LRSNSNLSPH VGTCYERLKR PALFQQRFSL KNHSNAGLLC PLVPAWKATS HLHSVASAAS PVLVPSPSEK NFASFATDFL
101: MGGVSAAVSK TAAAPIERIK LLIQNQDEMI KAGRLSEPYK GIGDCFGRTT KDEGLVSLWR GNTANVIRYF PTQALNFAFK DYFKKLFNFK KDRDGYWKWF
201: AGNMASGAAA GALSSVFVYS LDYARTRLAN DAKAGKTGGE RQFNGLVDVY RKTLRSDGVA GLYRGFNVSC VGIIVYRGLY FGMYDSLKPV LLVGTLQDSF
301: LASFALGWMV TIGASIASYP LDTVRRRMMM TSGEAVKYKS SFDAFSQIVK NEGSKSLFKG AGANILRAVA GAGVLSGYDK LQVLVLGKKY GSGGA

Best Arabidopsis Sequence Match ( AT3G08580.1 )
(BLAST)

001: MVDQVQHPTI AQKAAGQFMR SSVSKDVQVG YQRPSMYQRH ATYGNYSNAA FQFPPTSRML ATTASPVFVQ TPGEKGFTNF ALDFLMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMIKAGRL SEPYKGIGDC FGRTIKDEGF GSLWRGNTAN VIRYFPTQAL NFAFKDYFKR LFNFKKDRDG YWKWFAGNLA SGGAAGASSL
201: LFVYSLDYAR TRLANDAKAA KKGGGGRQFD GLVDVYRKTL KTDGIAGLYR GFNISCVGII VYRGLYFGLY DSVKPVLLTG DLQDSFFASF ALGWVITNGA
301: GLASYPIDTV RRRMMMTSGE AVKYKSSLDA FKQILKNEGA KSLFKGAGAN ILRAVAGAGV LSGYDKLQLI VFGKKYGSGG A

Arabidopsis Description

AAC1AAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V544]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.