CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045884_P001	Maize	extracellular, plastid	91.69	90.44
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	61.5	83.15
GSMUA_Achr9P19840_001	Banana	mitochondrion	24.1	76.99
GSMUA_Achr1P19560_001	Banana	cytosol	5.54	76.92
GSMUA_Achr3P11040_001	Banana	mitochondrion	72.58	71.78
KXG30875	Sorghum	plastid	72.3	67.44
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	72.85	67.26
EER95589	Sorghum	plastid	69.81	66.32
KRH23142	Soybean	cytosol, mitochondrion, plastid	71.19	65.06
GSMUA_Achr10P...	Banana	unclear	72.3	57.87
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	22.99	56.85
GSMUA_Achr1P19540_001	Banana	extracellular	14.13	55.43
EES04810	Sorghum	cytosol, mitochondrion, plastid	48.75	53.5
KXG22430	Sorghum	peroxisome	36.29	39.82

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A194YJX4	InterPro:Aden_trnslctor	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG19896	ProteinID:KXG19896	ProteinID:KXG19896.1	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	EnsemblPlantsGene:SORBI_3010G131600	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0007F2BC22
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:18073068..18074159

Molecular Weight (calculated)

39400.3 Da

IEP (calculated)

10.495

GRAVY (calculated)

-0.107

Length

361 amino acids

Sequence
(BLAST)

001: MAERRSNGGF ASQSSHLAAM MRGSYAPQSL WRPSSTSMPM PVGAVVASAP AEKNKKSFAA DFLLGGVSSS VSKTVAAPIE RVKMLLQNQD ELIRTGRLSE
101: PYRGIGDCFG RTVRDEGVLS LWRGNTTNVI RYFPTQALNF AFKDYFKSLF NFNRDRDGYW RWFAGNIVSG SAAGATSLLF VYSLDYARTR LTNDYKAAAA
201: MGKGGERQFT GLVDVYRKTL RSDGVAGLYR GFNVSVVGIV VYRGLYFGMY DSFKPVLLTG KLQDNFFASL ALGWMITNGA NLASYPLDTV RRRMMMTSGE
301: AVKYKSSMDA FAQIVRNEGP RSLFKGAGAN VLRAIAGAGA LAGYDQLQLI FFGKKYGSGG A

Best Arabidopsis Sequence Match ( AT5G13490.1 )
(BLAST)

001: MVEQTQHPTI LQKVSGQLLS SSVSQDIRGY ASASKRPATY QKHAAYGNYS NAAFQYPLVA ASQIATTTSP VFVQAPGEKG FTNFAIDFMM GGVSAAVSKT
101: AAAPIERVKL LIQNQDEMLK AGRLTEPYKG IRDCFGRTIR DEGIGSLWRG NTANVIRYFP TQALNFAFKD YFKRLFNFKK DKDGYWKWFA GNLASGGAAG
201: ASSLLFVYSL DYARTRLAND SKSAKKGGGE RQFNGLVDVY KKTLKSDGIA GLYRGFNISC AGIIVYRGLY FGLYDSVKPV LLTGDLQDSF FASFALGWLI
301: TNGAGLASYP IDTVRRRMMM TSGEAVKYKS SFDAFSQIVK KEGAKSLFKG AGANILRAVA GAGVLAGYDK LQLIVFGKKY GSGGA

Arabidopsis Description

AAC2AAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF67]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.