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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 1
  • mitochondrion 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016230_P001 Maize cytosol 65.96 86.8
Os11t0661300-01 Rice mitochondrion 82.37 82.37
TraesCS3D01G030800.1 Wheat mitochondrion 82.67 81.44
TraesCS3B01G050500.1 Wheat mitochondrion 82.67 81.44
TraesCS3A01G048500.1 Wheat cytosol, plastid 82.67 80.95
TraesCS3B01G033100.1 Wheat cytosol 82.07 80.6
GSMUA_Achr6P35660_001 Banana cytosol 69.0 75.42
GSMUA_AchrUn_... Banana cytosol 66.87 74.32
VIT_17s0000g04970.t01 Wine grape mitochondrion 66.87 70.97
KRH41838 Soybean cytosol 64.13 67.2
KRH60537 Soybean cytosol 63.22 66.24
Solyc06g069410.2.1 Tomato cytosol, mitochondrion, plastid 62.92 66.13
HORVU3Hr1G004820.22 Barley mitochondrion 82.37 66.1
AT5G17400.1 Thale cress cytosol 61.4 66.01
CDY02706 Canola cytosol, mitochondrion, plastid 61.4 65.8
Bra023616.1-P Field mustard cytosol, mitochondrion, plastid 61.09 65.47
PGSC0003DMT400010402 Potato cytosol, mitochondrion, plastid 62.01 65.18
CDX85456 Canola cytosol, mitochondrion, plastid 60.79 65.15
CDY01045 Canola golgi, mitochondrion, plastid 28.27 63.7
CDY58293 Canola cytosol 52.28 61.87
Bra019626.1-P Field mustard cytosol 51.37 60.79
CDX76233 Canola mitochondrion, plastid 39.21 58.37
CDY38426 Canola cytosol 62.01 56.2
Bra013981.1-P Field mustard plastid 61.09 55.99
CDY16928 Canola mitochondrion, plastid 61.7 53.99
KXG19896 Sorghum mitochondrion 53.5 48.75
EER95589 Sorghum plastid 54.41 47.11
KXG30875 Sorghum plastid 55.32 47.03
KXG22430 Sorghum peroxisome 31.31 31.31
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13EntrezGene:8085566InterPro:Aden_trnslctorUniProt:C5XYM1EnsemblPlants:EES04810
ProteinID:EES04810ProteinID:EES04810.1GO:GO:0000003GO:GO:0003674GO:GO:0005215GO:GO:0005471
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743
GO:GO:0005783GO:GO:0005789GO:GO:0006810GO:GO:0007275GO:GO:0008150GO:GO:0009791
GO:GO:0009987GO:GO:0015866GO:GO:0015867GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0022857GO:GO:0046902GO:GO:0048316GO:GO:0048364GO:GO:0048367GO:GO:0051503
GO:GO:0055085InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sf
PFAM:PF00153PRINTS:PR00926PRINTS:PR00927PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF472
EnsemblPlantsGene:SORBI_3004G102800SUPFAM:SSF103506TMHMM:TMhelixUniParc:UPI0001A8592FRefSeq:XP_002451834.1SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:9648246..9654918
Molecular Weight (calculated)
35902.2 Da
IEP (calculated)
10.462
GRAVY (calculated)
-0.103
Length
329 amino acids
Sequence
(BLAST)
001: MAAAPPDERK QERPLTPATS AASVAADFAM GGAAAVVAKT GAAPVERVKL LLQNQSEMLR RGTLTRPYKG IADAFARVLH EEGAAALWRG NQANVIRYFP
101: TQAFNFASRG YFKSFFGYDR EKDGQWKWLA GNVASGSAAG ATTSLLLYHL DYARTRLATD AIESRGTKRQ YRGLLDVYKK TLATDGMSGL YRGFSVSIMG
201: ITLYRGLYFG IYDSMKPLVL VGPLEGNFFA SFALGWAITT FSGACAYPFD TVRRRMMLTS GQPFKYKNGF HAVKLIVSNE GFFTLFRGVG ANILSGLAGA
301: GVLSGYDQLQ QLASRHGHNF ERKMKGALK
Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)
001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ
Arabidopsis Description
ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.