CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, vacuole
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013981.1-P	Field mustard	plastid	94.21	95.26
AT5G17400.1	Thale cress	cytosol	77.96	92.48
CDY02706	Canola	cytosol, mitochondrion, plastid	77.69	91.86
CDY58293	Canola	cytosol	69.15	90.29
CDX85456	Canola	cytosol, mitochondrion, plastid	76.31	90.23
CDY01045	Canola	golgi, mitochondrion, plastid	35.26	87.67
CDX76233	Canola	mitochondrion, plastid	52.62	86.43
CDY16928	Canola	mitochondrion, plastid	87.88	84.84
VIT_17s0000g04970.t01	Wine grape	mitochondrion	65.29	76.45
GSMUA_AchrUn_...	Banana	cytosol	60.06	73.65
KRH41838	Soybean	cytosol	63.36	73.25
KRH60537	Soybean	cytosol	62.26	71.97
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	61.71	71.57
GSMUA_Achr6P35660_001	Banana	cytosol	59.23	71.43
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	61.43	71.25
TraesCS3B01G050500.1	Wheat	mitochondrion	58.4	63.47
TraesCS3B01G033100.1	Wheat	cytosol	58.4	63.28
Os11t0661300-01	Rice	mitochondrion	57.3	63.22
TraesCS3D01G030800.1	Wheat	mitochondrion	58.13	63.17
TraesCS3A01G048500.1	Wheat	cytosol, plastid	58.4	63.1
EES04810	Sorghum	cytosol, mitochondrion, plastid	56.2	62.01
Zm00001d016230_P001	Maize	cytosol	42.7	62.0
CDY42596	Canola	peroxisome	25.07	52.0
HORVU3Hr1G004820.22	Barley	mitochondrion	58.4	51.71
CDY01046	Canola	plastid	13.5	51.04
CDY14242	Canola	plastid	50.69	48.81
CDX97439	Canola	plastid	50.69	48.81
CDX69638	Canola	mitochondrion, plastid	47.93	46.77
CDX78525	Canola	plastid	48.48	46.68
CDX70507	Canola	plastid	48.48	46.68
CDY09801	Canola	plastid	48.21	46.05
CDX91117	Canola	plastid	48.21	45.93
CDY47751	Canola	nucleus, plastid	19.28	28.23
CDY20722	Canola	mitochondrion	11.02	25.81
CDY32779	Canola	cytosol, mitochondrion, nucleus	4.41	25.4
CDX85645	Canola	plastid	48.48	25.29
CDY32780	Canola	cytosol	9.09	23.91

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078HL89	UniProt:A0A078HL89	InterPro:Aden_trnslctor	EnsemblPlants:CDY38426
ProteinID:CDY38426	ProteinID:CDY38426.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00065862001	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF472	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI0004EF322A	SEG:seg	:	:	:	:

Description

BnaA10g17320DBnaA10g17320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HL89]

Coordinates

chrLK032424:-:8123..9597

Molecular Weight (calculated)

40123.8 Da

IEP (calculated)

10.186

GRAVY (calculated)

0.013

Length

363 amino acids

Sequence
(BLAST)

001: MIISFLFYFI ELHNETTTRF SSPSPGDDLS PPTSPLSLSL CGEDHIGIIS RRGQAKKMAF VGKPEKFSTD FMMGGAAAIV AKSAAAPIER VKLLLQNQGE
101: MIKTGHLTRP YTGLGNCFLR IFREEGVLSF WRGNQANVIR YFPTQASNFA FKGYFKTRLG CSKEKDGYLK WFAGNVASGS AAGATTSLFL YHLDYARTRL
201: GTDAKECSVT GKRQFKGMVD VYRKTLSSDG VKGLYRGFGV SILGITLYRG MYFGMYDTFK PIVLVGSLEG NFLASFLLGW SITTSAGVIA YPFDTVRRRM
301: MLTSGQPVKY RNAVHALREI LKYEGFFALY RGVTANMLLG VAGAGVLAGY DQLHRIAYKH LVQ

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.