CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09801	Canola	plastid	97.64	97.89
CDX78525	Canola	plastid	96.85	97.88
CDX70507	Canola	plastid	96.59	97.61
CDX69638	Canola	mitochondrion, plastid	95.01	97.31
GSMUA_Achr1P19560_001	Banana	cytosol	6.56	96.15
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	62.47	89.14
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	87.93	87.01
Solyc01g087070.2.1	Tomato	unclear	76.12	83.81
KRH20834	Soybean	mitochondrion	79.53	82.11
GSMUA_Achr3P11040_001	Banana	mitochondrion	77.17	80.55
GSMUA_Achr9P19840_001	Banana	mitochondrion	23.88	80.53
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	82.94	80.41
KRH43521	Soybean	cytosol, mitochondrion, plastid	81.1	79.64
PGSC0003DMT400017550	Potato	cytosol, mitochondrion, plastid	78.48	79.1
KRH13934	Soybean	mitochondrion	80.58	78.92
Os02t0718900-01	Rice	mitochondrion	77.69	77.49
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	28.87	77.46
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	77.17	77.37
TraesCS6A01G282200.1	Wheat	plastid	76.9	77.11
HORVU6Hr1G070780.1	Barley	plastid	76.64	76.84
KXG30875	Sorghum	plastid	77.17	75.97
Zm00001d051685_P002	Maize	plastid	77.17	75.97
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	77.95	75.96
Zm00001d017857_P002	Maize	plastid	77.43	75.84
TraesCS6B01G310600.1	Wheat	plastid	77.43	75.45
CDY14242	Canola	plastid	74.28	75.07
CDX97439	Canola	plastid	74.02	74.8
GSMUA_Achr10P...	Banana	unclear	79.0	66.74
VIT_13s0064g01050.t01	Wine grape	cytosol	81.1	64.78
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	23.88	62.33
CDY02706	Canola	cytosol, mitochondrion, plastid	46.72	57.98
CDX85456	Canola	cytosol, mitochondrion, plastid	45.67	56.68
GSMUA_Achr1P19540_001	Banana	extracellular	13.39	55.43
CDX85645	Canola	plastid	98.43	53.88
CDY01045	Canola	golgi, mitochondrion, plastid	20.21	52.74
CDY58293	Canola	cytosol	38.06	52.16
CDX76233	Canola	mitochondrion, plastid	29.92	51.58
CDY38426	Canola	cytosol	45.93	48.21
CDY16928	Canola	mitochondrion, plastid	45.93	46.54
CDY42596	Canola	peroxisome	19.42	42.29
CDY01046	Canola	plastid	9.71	38.54
CDY20722	Canola	mitochondrion	13.12	32.26
CDY47751	Canola	nucleus, plastid	21.0	32.26
CDY32779	Canola	cytosol, mitochondrion, nucleus	5.25	31.75
CDY32780	Canola	cytosol	9.71	26.81

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078DQC9	InterPro:Aden_trnslctor	EnsemblPlants:CDX91117	ProteinID:CDX91117
ProteinID:CDX91117.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00151902001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI000182BB32	SEG:seg

Description

BnaC02g04800D

Coordinates

chrLK031865:-:843894..846154

Molecular Weight (calculated)

41421.7 Da

IEP (calculated)

10.280

GRAVY (calculated)

-0.144

Length

381 amino acids

Sequence
(BLAST)

001: MVEQTQQQPS ILQKASSGQL MRSGVSQDIH GYASGFQRRA TYGNYSNAAF QYPLAASSRI VATTTTSPVF VQAPSEKGFS SFAIDFLMGG VSAAVSKTAA
101: APIERVKLLI QNQDEMLKAG RLSEPYKGIG DCFGRTIKDE GFGSLWRGNT ANVIRYFPTQ ALNFAFKDYF KRLFNFKKDR DGYWKWFAGN LGSGGAAGAS
201: SLLFVYSLDY ARTRLANDSK AAKKGGERQF NGLVDVYKKT LKSDGIAGLY RGFNISCVGI IVYRGLYFGL YDSLKPLLPA DLQDSFFASF ALGWLITNGA
301: GLASYPIDTV RRRMMMTSGE AVKYKSSMDA FQQILKKEGP KSLFKGAGAN ILRAIAGAGV LSGYDKLQLL LLGKKYGSGS G

Best Arabidopsis Sequence Match ( AT5G13490.1 )
(BLAST)

001: MVEQTQHPTI LQKVSGQLLS SSVSQDIRGY ASASKRPATY QKHAAYGNYS NAAFQYPLVA ASQIATTTSP VFVQAPGEKG FTNFAIDFMM GGVSAAVSKT
101: AAAPIERVKL LIQNQDEMLK AGRLTEPYKG IRDCFGRTIR DEGIGSLWRG NTANVIRYFP TQALNFAFKD YFKRLFNFKK DKDGYWKWFA GNLASGGAAG
201: ASSLLFVYSL DYARTRLAND SKSAKKGGGE RQFNGLVDVY KKTLKSDGIA GLYRGFNISC AGIIVYRGLY FGLYDSVKPV LLTGDLQDSF FASFALGWLI
301: TNGAGLASYP IDTVRRRMMM TSGEAVKYKS SFDAFSQIVK KEGAKSLFKG AGANILRAVA GAGVLAGYDK LQLIVFGKKY GSGGA

Arabidopsis Description

AAC2AAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF67]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.