Factsheet for VIT_19s0177g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20834	Soybean	mitochondrion	79.58	30.62
Os02t0718900-01	Rice	mitochondrion	80.28	29.84
AT3G08580.2	Thale cress	mitochondrion, plastid	79.58	29.66
KRH43521	Soybean	cytosol, mitochondrion, plastid	80.99	29.64
CDX69638	Canola	mitochondrion, plastid	77.46	29.57
KRH13934	Soybean	mitochondrion	80.99	29.56
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	81.69	29.52
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	79.58	29.35
Bra008826.1-P	Field mustard	mitochondrion, plastid	76.76	29.22
HORVU6Hr1G070780.1	Barley	plastid	78.17	29.21
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	78.17	29.21
TraesCS6A01G282200.1	Wheat	plastid	78.17	29.21
Bra006203.1-P	Field mustard	plastid	77.46	29.18
CDX78525	Canola	plastid	77.46	29.18
CDX70507	Canola	plastid	77.46	29.18
CDY09801	Canola	plastid	77.46	28.95
Zm00001d051685_P002	Maize	plastid	78.87	28.94
KXG30875	Sorghum	plastid	78.87	28.94
CDX91117	Canola	plastid	77.46	28.87
Zm00001d017857_P002	Maize	plastid	78.87	28.79
VIT_12s0028g03380.t01	Wine grape	plastid	77.46	28.72
TraesCS6B01G310600.1	Wheat	plastid	78.87	28.64
VIT_13s0064g01050.t01	Wine grape	cytosol	85.21	25.37
VIT_17s0000g04970.t01	Wine grape	mitochondrion	52.11	23.87
CDX85645	Canola	plastid	77.46	15.8
VIT_04s0008g01130.t01	Wine grape	cytosol	35.21	15.48
VIT_16s0039g00600.t01	Wine grape	cytosol	4.93	2.81
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	0.0	0.0
VIT_03s0038g00080.t01	Wine grape	plastid	0.0	0.0
VIT_10s0116g01120.t01	Wine grape	plastid	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	ProteinID:CCB48813	ProteinID:CCB48813.1	UniProt:F6H9C0	EMBL:FN595498
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0046902
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506
TMHMM:TMhelix	UniParc:UPI000210A3BC	ArrayExpress:VIT_19s0177g00370	EnsemblPlantsGene:VIT_19s0177g00370	EnsemblPlants:VIT_19s0177g00370.t01	:

Description

No Description!

Coordinates

chr19:-:6213932..6214360

Molecular Weight (calculated)

15463.9 Da

IEP (calculated)

8.620

GRAVY (calculated)

0.256

Length

142 amino acids

Sequence
(BLAST)

001: GQRLVDVYRK TLKSDGIAGF YRGVNISCVG IIVCRGLYFG ISDPLKPVVF TGGLQDSFFA SFALCWLITN DAGLASYPME TVRRRMMMTS GEAVKHKSFF
101: DAFAQVLKNE GIKSLFKGAD ANILCAVADA GVLAGYDKLQ EM

Best Arabidopsis Sequence Match ( AT3G08580.1 )
(BLAST)

001: MVDQVQHPTI AQKAAGQFMR SSVSKDVQVG YQRPSMYQRH ATYGNYSNAA FQFPPTSRML ATTASPVFVQ TPGEKGFTNF ALDFLMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMIKAGRL SEPYKGIGDC FGRTIKDEGF GSLWRGNTAN VIRYFPTQAL NFAFKDYFKR LFNFKKDRDG YWKWFAGNLA SGGAAGASSL
201: LFVYSLDYAR TRLANDAKAA KKGGGGRQFD GLVDVYRKTL KTDGIAGLYR GFNISCVGII VYRGLYFGLY DSVKPVLLTG DLQDSFFASF ALGWVITNGA
301: GLASYPIDTV RRRMMMTSGE AVKYKSSLDA FKQILKNEGA KSLFKGAGAN ILRAVAGAGV LSGYDKLQLI VFGKKYGSGG A

Arabidopsis Description

AAC1AAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V544]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.