Factsheet for VIT_16s0039g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	58.63	95.42
GSMUA_Achr1P19560_001	Banana	cytosol	8.84	84.62
VIT_10s0116g01120.t01	Wine grape	plastid	49.8	84.35
VIT_03s0038g00080.t01	Wine grape	plastid	46.18	62.16
VIT_12s0028g03380.t01	Wine grape	plastid	45.38	29.5
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	30.52	19.34
VIT_13s0064g01050.t01	Wine grape	cytosol	29.72	15.51
TraesCS1A01G434300.1	Wheat	peroxisome	18.07	14.75
VIT_17s0000g04970.t01	Wine grape	mitochondrion	17.67	14.19
VIT_04s0008g01130.t01	Wine grape	cytosol	13.65	10.53
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	2.81	4.93
GSMUA_Achr1P19540_001	Banana	extracellular	0.4	1.09

Protein Annotations

Gene3D:1.50.40.10	MapMan:35.1	InterPro:Aden_trnslctor	ProteinID:CCB52935	ProteinID:CCB52935.1	UniProt:F6HJP2
EMBL:FN595787	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006139	GO:GO:0006259
GO:GO:0006281	GO:GO:0006284	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mt_carrier_dom_sf	PRINTS:PR00926	PRINTS:PR00927	PANTHER:PTHR24089
PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	UniParc:UPI000210931E	ArrayExpress:VIT_16s0039g00600	EnsemblPlantsGene:VIT_16s0039g00600	EnsemblPlants:VIT_16s0039g00600.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr16_random:+:313921..315954

Molecular Weight (calculated)

27857.8 Da

IEP (calculated)

10.256

GRAVY (calculated)

-0.220

Length

249 amino acids

Sequence
(BLAST)

001: MFDLISPTRS ASSLIIYAKE EERAVVSHGD LHELRSSFLV SNMVDGSQHS LIFQKINGQS YLFSILSPNL QSRNTSVHSL SSAYVNGGLQ TSLLPTSNGN
101: GLAWPLYHPC LPSLLKLLWR KVQKVFMIDF LMGGVSIAVS KSAAASIERV KLLIQNRDEI IKATMLSELY KGITDCFART NKNEDTSAEA TTLKTIGKKK
201: ESDKSSILLD VKAWDDETNM KRDHPLTRVL KIGLSLKRSL RYTQNKIRR

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.