CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85456	Canola	cytosol, mitochondrion, plastid	96.09	96.09
AT5G17400.1	Thale cress	cytosol	90.55	90.85
CDY01045	Canola	golgi, mitochondrion, plastid	41.37	86.99
CDY58293	Canola	cytosol	77.85	85.97
CDX76233	Canola	mitochondrion, plastid	58.63	81.45
CDY38426	Canola	cytosol	91.86	77.69
VIT_17s0000g04970.t01	Wine grape	mitochondrion	76.22	75.48
CDY16928	Canola	mitochondrion, plastid	92.18	75.27
GSMUA_AchrUn_...	Banana	cytosol	71.34	73.99
KRH41838	Soybean	cytosol	75.57	73.89
KRH60537	Soybean	cytosol	74.27	72.61
GSMUA_Achr6P35660_001	Banana	cytosol	70.36	71.76
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	72.31	70.93
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	72.31	70.93
TraesCS3B01G050500.1	Wheat	mitochondrion	69.71	64.07
TraesCS3B01G033100.1	Wheat	cytosol	69.71	63.88
TraesCS3D01G030800.1	Wheat	mitochondrion	69.38	63.77
TraesCS3A01G048500.1	Wheat	cytosol, plastid	69.71	63.69
Os11t0661300-01	Rice	mitochondrion	68.08	63.53
EES04810	Sorghum	cytosol, mitochondrion, plastid	65.8	61.4
Zm00001d016230_P001	Maize	cytosol	49.84	61.2
HORVU3Hr1G004820.22	Barley	mitochondrion	69.38	51.95
CDY01046	Canola	plastid	15.64	50.0
CDY42596	Canola	peroxisome	28.01	49.14
CDY14242	Canola	plastid	59.93	48.81
CDX97439	Canola	plastid	59.93	48.81
CDX69638	Canola	mitochondrion, plastid	57.98	47.85
CDX78525	Canola	plastid	57.65	46.95
CDX70507	Canola	plastid	57.65	46.95
CDY09801	Canola	plastid	57.98	46.84
CDX91117	Canola	plastid	57.98	46.72
CDY47751	Canola	nucleus, plastid	22.8	28.23
CDX85645	Canola	plastid	57.65	25.43
CDY32779	Canola	cytosol, mitochondrion, nucleus	5.21	25.4
CDY20722	Canola	mitochondrion	12.7	25.16
CDY32780	Canola	cytosol	10.1	22.46

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078ENH3	InterPro:Aden_trnslctor	EnsemblPlants:CDY02706	ProteinID:CDY02706
ProteinID:CDY02706.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00114857001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF472	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EE9A20	SEG:seg

Description

BnaC02g07290D

Coordinates

chrLK031936:+:1012265..1014036

Molecular Weight (calculated)

33886.2 Da

IEP (calculated)

10.353

GRAVY (calculated)

0.009

Length

307 amino acids

Sequence
(BLAST)

001: MTSIRKPEKF STDFAMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL TTPYSGISNC FLRIFKEEGA LSFWRGNQAN VIRYFPTQAS NFAFKGYFKT
101: LLGCSKERDG YFKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKES SVNGKRQFKG MVDVYRKTLS SDGVKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNAVHAL REIMKTEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHRIA
301: YKHWVVQ

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.