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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005828.1-P Field mustard cytosol, peroxisome, plasma membrane 99.65 99.65
CDX80929 Canola peroxisome 97.04 98.76
CDX70183 Canola plasma membrane 89.65 93.73
CDX98803 Canola peroxisome 92.78 92.14
AT5G04930.1 Thale cress peroxisome 92.09 91.45
Solyc01g096930.2.1 Tomato plastid 70.43 69.11
PGSC0003DMT400070787 Potato plastid 70.35 69.09
Zm00001d028987_P001 Maize plasma membrane 54.09 68.05
VIT_13s0047g01210.t01 Wine grape plasma membrane 71.04 66.59
KRH13093 Soybean plasma membrane, plastid 68.35 66.55
KRH44746 Soybean plasma membrane, plastid 68.35 66.55
Os03t0326100-01 Rice peroxisome 27.39 65.62
TraesCS4A01G130300.1 Wheat plasma membrane 63.39 64.97
TraesCS4B01G174300.1 Wheat plasma membrane 63.3 64.94
HORVU4Hr1G051450.4 Barley plasma membrane 63.13 64.76
KRH62754 Soybean plastid 67.65 64.67
KRH56288 Soybean plastid 68.43 64.14
TraesCS4D01G176300.2 Wheat plasma membrane 56.61 63.82
KRH57832 Soybean mitochondrion, plasma membrane 17.83 61.93
TraesCS3D01G193200.1 Wheat plasma membrane 62.26 61.56
Os01t0277600-00 Rice plasma membrane 62.87 61.53
TraesCS3B01G218800.1 Wheat plasma membrane 62.0 61.36
EES02769 Sorghum plasma membrane 62.7 61.1
HORVU3Hr1G039540.1 Barley plasma membrane 61.74 61.1
TraesCS3A01G189700.1 Wheat plasma membrane 58.87 60.83
Zm00001d040456_P002 Maize plasma membrane 62.17 60.7
GSMUA_Achr3P09470_001 Banana plasma membrane 47.65 58.74
GSMUA_AchrUn_... Banana plasma membrane 27.04 58.46
OQU92666 Sorghum plasma membrane, plastid 62.35 58.39
GSMUA_Achr10P... Banana plasma membrane 33.48 58.07
GSMUA_Achr5P27740_001 Banana plasma membrane 59.13 56.86
GSMUA_Achr5P07640_001 Banana plasma membrane 52.78 56.31
GSMUA_Achr10P... Banana plasma membrane 22.52 55.82
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 26.87 54.69
GSMUA_Achr3P09480_001 Banana cytosol 11.74 54.66
GSMUA_Achr9P05000_001 Banana plasma membrane 53.04 54.56
Zm00001d028988_P001 Maize peroxisome 30.0 51.96
TraesCS4B01G174200.1 Wheat plasma membrane 29.91 51.19
TraesCS4D01G176200.1 Wheat cytosol, mitochondrion, plasma membrane 31.04 50.35
GSMUA_Achr8P21510_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 59.04 48.16
Os03t0326200-01 Rice plastid 30.96 45.47
CDY70011 Canola cytosol 3.91 35.71
CDY72124 Canola peroxisome, plasma membrane 15.48 34.17
CDY44442 Canola plasma membrane 35.13 33.81
CDX86464 Canola peroxisome 35.13 33.81
CDY20531 Canola mitochondrion 33.3 33.51
CDX81828 Canola mitochondrion, plasma membrane 35.48 33.5
CDY21747 Canola mitochondrion, plasma membrane 35.48 33.5
CDY51126 Canola mitochondrion 33.13 33.33
CDY38611 Canola mitochondrion, plasma membrane 34.52 33.11
CDX95995 Canola mitochondrion, plasma membrane 34.52 33.03
CDY26129 Canola mitochondrion 35.13 32.9
CDY08221 Canola mitochondrion 35.04 32.82
CDY55204 Canola mitochondrion 35.22 32.79
CDY10603 Canola mitochondrion 35.39 32.77
CDX72937 Canola mitochondrion, plasma membrane 34.96 32.74
CDY02467 Canola mitochondrion 35.3 32.69
CDY24494 Canola plastid 34.52 32.67
CDY34893 Canola plastid 34.52 32.65
CDX96429 Canola mitochondrion 34.78 32.63
CDY48077 Canola mitochondrion 34.09 32.59
CDY46505 Canola mitochondrion 34.0 32.53
CDX99767 Canola mitochondrion 34.0 32.53
CDY07368 Canola mitochondrion 33.74 32.36
CDY19388 Canola mitochondrion 33.74 32.15
CDY07798 Canola plastid 34.61 31.99
CDX98001 Canola mitochondrion 33.83 31.99
CDY26633 Canola mitochondrion 33.48 31.92
CDY04247 Canola mitochondrion 33.48 31.77
CDY16073 Canola mitochondrion, plasma membrane 33.3 31.76
CDY49858 Canola mitochondrion, plasma membrane 32.35 31.58
CDY22301 Canola plasma membrane 30.26 31.58
CDY53865 Canola mitochondrion, plasma membrane 32.43 31.42
CDX94764 Canola plasma membrane 30.09 31.4
CDX96956 Canola plasma membrane 26.96 29.92
CDY27294 Canola plastid 27.74 27.64
CDY65725 Canola plasma membrane 11.39 26.9
CDY33607 Canola plastid 34.52 22.1
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000MapMan:5.8.2.1.1.1GO:A0A078FGW3UniProt:A0A078FGW3
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY11318ProteinID:CDY11318
ProteinID:CDY11318.1GO:GO:0000166GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004012
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0009987GO:GO:0015914GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016787
GO:GO:0045332EnsemblPlantsGene:GSBRNA2T00049362001InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299
InterPro:P-type_ATPase_IVInterPro:P-type_ATPase_NPFAM:PF00122PFAM:PF13246PFAM:PF16209PFAM:PF16212
PRINTS:PR00119ScanProsite:PS00154PANTHER:PTHR24092PANTHER:PTHR24092:SF74InterPro:P_typ_ATPaseInterPro:P_typ_ATPase_c
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652
TMHMM:TMhelixUniParc:UPI0004EEFB0DSEG:seg:::
Description
BnaA03g01540DPhospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078FGW3]
Coordinates
chrLK032010:+:695489..700342
Molecular Weight (calculated)
129685.0 Da
IEP (calculated)
6.143
GRAVY (calculated)
-0.004
Length
1150 amino acids
Sequence
(BLAST)
0001: MDKPPPHHES ISSRWSFSSK DKEVTFADLG SKRIRHGSAG ADSEMLSMSQ KEIRDEDARL IYINDPDRTN ETFDFTGNSI KTAKYSVFTF LPRNLFEQFH
0101: RVAYVYFLVI AVLNQLPQLA VFGRGASIMP LAFVLLVSAI KDAYEDFRRH RSDRVENNRL ALVFEDNEFK EKQWKYIRVG EVIKVVSNQT LPCDMVLLAT
0201: SDPTGVVYVQ TTNLDGESNL KTRYAKQETL QKATDLETFD GFIKCEKPNR NIYGFQANME IDGRRLSLGP SNIILRGCEL KNTEWALGVV VYAGSETKAM
0301: LNNSGAPSKR SRLETRMNLE IILLSLFLIA LCTTAAATAA VWLRTHRDDL DTILFYRRKD YSVRPEGKNH NYYGWGWEIF FTFFMAVIVY QIMIPISLYI
0401: SMELVRIGQA YFMTRDDLMY DESSNSSFQC RALNINEDLG QIKYLFSDKT GTLTDNKMEF QCACIGGVDY SGREPAESEQ EGYSVEVDGV TLKPKMRVRV
0501: DPSLLQLTRN NKATEEAKRA NEFFLSLAAC NTIVPIVTNT SDPNVKLVDY QGESPDEQAL VYAAAAYGFL LIERTSGHIV INVRGEMQRF NVLGLHEFDS
0601: DRKRMSVILG CPDTSVKLFV KGADSSMFSV MDEESYGDVI EATKKQLHAY SSDGLRTLVV GMRKLNDTEF EQWHASFEAA STALIGRAGL LRKVAGNIET
0701: KLRIVGATAI EDKLQRGVPE AIESLRIAGI KVWVLTGDKQ ETAISIGFSS RLLTRNMRQI VINSNSLDSC RRSLEEANAS VASDDEESVA LIIDGTSLIY
0801: VLDNDLEDVL FQVACKSSAV LCCRVAPFQK AGIVALVKNR TSDMTLAIGD GANDVSMIQM ADVGVGISGQ EGRQAVMASD FAMGQFRFLV PLLLVHGHWN
0901: YQRMGYMILY NFYRNAVFVL ILFWYVLFTC YTLTTAITEW SSVLYSVVYT SFPTIVIGIL DKNLGRRILL SHPQLYGVGQ RAEGYSTTLF WYTMFDTVWQ
1001: SAAIFFIPLF AYWGSTIDTS SLGDLWTIAA VVVVNLHLAM DVIRWNWIAH AAIWGSIVAA CICVVVIDVI PTLPGYWAIF QVAKTWMFWF CLLAIVVTAL
1101: LPRFAIKFLV EYYRPSDVRI AREVEKLRSF SESQQNMGTE MNQIRDPPRR
Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)
0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR
Arabidopsis Description
ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.