Factsheet for PGSC0003DMT400070787

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096930.2.1	Tomato	plastid	96.75	96.67
KRH13093	Soybean	plasma membrane, plastid	73.44	72.82
CDX70183	Canola	plasma membrane	67.81	72.18
Bra009410.1-P	Field mustard	plasma membrane	67.72	72.09
KRH44746	Soybean	plasma membrane, plastid	72.59	71.97
VIT_13s0047g01210.t01	Wine grape	plasma membrane	74.89	71.48
AT5G04930.1	Thale cress	peroxisome	70.11	70.9
CDX80929	Canola	peroxisome	68.15	70.62
CDY11318	Canola	peroxisome	69.09	70.35
Bra005828.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.09	70.35
CDX98803	Canola	peroxisome	69.51	70.29
KRH62754	Soybean	plastid	71.65	69.74
Zm00001d028987_P001	Maize	plasma membrane	53.37	68.38
KRH56288	Soybean	plastid	71.65	68.38
TraesCS4A01G130300.1	Wheat	plasma membrane	62.77	65.51
TraesCS4B01G174300.1	Wheat	plasma membrane	62.6	65.39
HORVU4Hr1G051450.4	Barley	plasma membrane	62.34	65.12
TraesCS4D01G176300.2	Wheat	plasma membrane	56.62	65.0
KRH57832	Soybean	mitochondrion, plasma membrane	18.36	64.95
Os03t0326100-01	Rice	peroxisome	26.39	64.38
TraesCS3D01G193200.1	Wheat	plasma membrane	63.88	64.32
HORVU3Hr1G039540.1	Barley	plasma membrane	63.54	64.03
TraesCS3B01G218800.1	Wheat	plasma membrane	63.45	63.94
Os01t0277600-00	Rice	plasma membrane	64.05	63.83
EES02769	Sorghum	plasma membrane	64.05	63.56
TraesCS3A01G189700.1	Wheat	plasma membrane	60.38	63.52
Zm00001d040456_P002	Maize	plasma membrane	63.11	62.73
GSMUA_Achr3P09470_001	Banana	plasma membrane	49.27	61.84
GSMUA_AchrUn_...	Banana	plasma membrane	28.1	61.84
GSMUA_Achr10P...	Banana	plasma membrane	34.5	60.94
OQU92666	Sorghum	plasma membrane, plastid	63.71	60.75
GSMUA_Achr5P27740_001	Banana	plasma membrane	60.38	59.11
GSMUA_Achr5P07640_001	Banana	plasma membrane	54.14	58.81
GSMUA_Achr10P...	Banana	plasma membrane	22.63	57.11
GSMUA_Achr9P05000_001	Banana	plasma membrane	54.14	56.71
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	27.16	56.28
Zm00001d028988_P001	Maize	peroxisome	31.08	54.82
PGSC0003DMT400080209	Potato	plasma membrane	34.24	54.34
TraesCS4B01G174200.1	Wheat	plasma membrane	30.91	53.87
TraesCS4D01G176200.1	Wheat	cytosol, mitochondrion, plasma membrane	32.45	53.6
GSMUA_Achr8P21510_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	62.6	51.99
GSMUA_Achr3P09480_001	Banana	cytosol	10.85	51.42
Os03t0326200-01	Rice	plastid	32.71	48.91
PGSC0003DMT400019314	Potato	mitochondrion	35.35	34.73
PGSC0003DMT400001292	Potato	cytosol	31.34	34.66
PGSC0003DMT400053816	Potato	cytosol, plasma membrane, plastid	5.89	34.16
PGSC0003DMT400083890	Potato	mitochondrion	33.82	32.81
PGSC0003DMT400064690	Potato	mitochondrion	33.48	32.8
PGSC0003DMT400006627	Potato	mitochondrion	33.22	32.15
PGSC0003DMT400012383	Potato	cytosol	33.13	31.99
PGSC0003DMT400054638	Potato	plasma membrane	33.05	31.11
PGSC0003DMT400023828	Potato	plasma membrane	19.64	30.5

Protein Annotations

EntrezGene:102600478	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M1CMP7	InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N
PFAM:PF00122	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212	EnsemblPlantsGene:PGSC0003DMG400027523	PGSC:PGSC0003DMG400027523
EnsemblPlants:PGSC0003DMT400070787	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR24092	PANTHER:PTHR24092:SF74	InterPro:P_typ_ATPase
InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI00029566D9	RefSeq:XP_006347713.1	SEG:seg	:

Description

Phospholipid-transporting atpase [Source:PGSC_GENE;Acc:PGSC0003DMG400027523]

Coordinates

chr1:+:74708798..74714735

Molecular Weight (calculated)

130944.0 Da

IEP (calculated)

6.728

GRAVY (calculated)

0.014

Length

1171 amino acids

Sequence
(BLAST)

0001: MENNSPVTDS IMMKSSSIRS MSSNRSRASG GGSVREVNLG EFGSKPVRYG SQGADSEGYG TSQKEISDED SRVVYLNDPE RTNEKFEFSV NSIRTAKYSI
0101: VTFLPRNLFE QFHRVAYIYF LVIAILNQLP MLAVFGRGAS ILPLAFVLLV TAIKDAYEDY RRHRSDRIEN NRLALVLLDG QFQEKKWKEI KVGEIIKLSS
0201: SGTIPCDMVL LSTSDPTGVA YIQTINLDGE SNLKTRYAKQ ETQMKMPEKD SISGMIKCEK PNRNIYGFHA NMEIDGKRVS LGPSNIILRG CELKNTSWAI
0301: GVAVYAGRET KAMLNNSGAP SKRSRLETRM NREIIILSFF LVALCTLVSI CAGVWLRHHK DELNTIPFYR KLDFSEDEIE DYNYYGWGLE MVFTFLMSVI
0401: VYQIMIPISL YISMELVRVG QAYFMIQDNR MYDETSKSRF QCRALNINED LGQIKYVFSD KTGTLTENKM EFQCASIWGV DYGSGKSDPQ EVAGCSVQDG
0501: QVLRPKTKVK VDPVLLNISK NGKHSDEGKH VHDFFLALAA CNTIVPLAVE TSDPAMKLVD YQGESPDEQA LVYAAAAYGF MLIERTSGHI VIDVQGERQR
0601: FNVLGLHEFD SDRKRMSVIL GCPDNTVKVF VKGADTTMFG IIDKSLSLNV VRATELHLHS YSSMGLRTLV VGMREMSASE FEEWQSSYEA ANTAVIGRAA
0701: LLRKVAGNVE KNLTILGASG IEDKLQEGVP EAIESLRVAG IKVWVLTGDK QETAISIGYS SKLLTNSMTQ IVINNKSKES CKRSLEAGLT RCKSLSPHNA
0801: EENIGAGASA IALIIDGTSL VYVLDGELEE LLFQLASYCS VVLCCRVAPL QKAGIVALIK NRTDDMTLAI GDGANDVSMI QMADVGIGIS GQEGRQAVMA
0901: SDFAMGQFRF LVPLLLVHGH WNYQRMGYMI LYNFYRNAIL VFVLFWYALF TAFTLTTALT DWSSMLYSII YTAVPTIVVG ILDKDLSRVT LMKYPQLYGP
1001: GQRQESYNKK LFWVTMIDTL WQSIVAFFVP VLAYWESEID ISSIGDLWTL AVVILVNVHL AMDVIRWSWI THAAIWGSIA ATFICVIAID SLAFLPGYWA
1101: IFHAAGEAKF WFCLLSITIA ALAPRFVVKA YIRHARPRDI QIAREGEKFR NLRDSQTAEI EMNPIVDPPR R

Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)

0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR

Arabidopsis Description

ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.