Factsheet for VIT_13s0047g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096930.2.1	Tomato	plastid	71.88	75.26
PGSC0003DMT400070787	Potato	plastid	71.48	74.89
KRH13093	Soybean	plasma membrane, plastid	71.31	74.09
KRH44746	Soybean	plasma membrane, plastid	71.23	74.01
KRH62754	Soybean	plastid	72.13	73.57
Bra009410.1-P	Field mustard	plasma membrane	64.63	72.09
CDX70183	Canola	plasma membrane	64.63	72.09
KRH56288	Soybean	plastid	71.48	71.48
CDX80929	Canola	peroxisome	65.69	71.33
AT5G04930.1	Thale cress	peroxisome	67.16	71.16
Bra005828.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.59	71.04
CDY11318	Canola	peroxisome	66.59	71.04
CDX98803	Canola	peroxisome	66.42	70.38
Zm00001d028987_P001	Maize	plasma membrane	51.51	69.15
KRH57832	Soybean	mitochondrion, plasma membrane	18.42	68.28
TraesCS4A01G130300.1	Wheat	plasma membrane	61.53	67.29
TraesCS4B01G174300.1	Wheat	plasma membrane	61.45	67.26
TraesCS4D01G176300.2	Wheat	plasma membrane	55.75	67.06
HORVU4Hr1G051450.4	Barley	plasma membrane	61.12	66.9
Os03t0326100-01	Rice	peroxisome	25.59	65.42
Os01t0277600-00	Rice	plasma membrane	62.59	65.36
TraesCS3D01G193200.1	Wheat	plasma membrane	61.61	65.0
TraesCS3B01G218800.1	Wheat	plasma membrane	61.45	64.89
HORVU3Hr1G039540.1	Barley	plasma membrane	61.29	64.72
EES02769	Sorghum	plasma membrane	62.1	64.58
GSMUA_Achr3P09470_001	Banana	plasma membrane	49.06	64.52
TraesCS3A01G189700.1	Wheat	plasma membrane	58.52	64.51
Zm00001d040456_P002	Maize	plasma membrane	61.53	64.09
GSMUA_AchrUn_...	Banana	plasma membrane	27.38	63.16
OQU92666	Sorghum	plasma membrane, plastid	61.29	61.24
GSMUA_Achr10P...	Banana	plasma membrane	33.09	61.24
GSMUA_Achr5P27740_001	Banana	plasma membrane	59.49	61.04
GSMUA_Achr5P07640_001	Banana	plasma membrane	53.55	60.95
GSMUA_Achr9P05000_001	Banana	plasma membrane	53.3	58.5
GSMUA_Achr10P...	Banana	plasma membrane	22.0	58.19
VIT_08s0058g01400.t01	Wine grape	plasma membrane	55.75	57.92
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	26.32	57.17
GSMUA_Achr3P09480_001	Banana	cytosol	11.41	56.68
Zm00001d028988_P001	Maize	peroxisome	29.99	55.42
TraesCS4B01G174200.1	Wheat	plasma membrane	29.42	53.72
TraesCS4D01G176200.1	Wheat	cytosol, mitochondrion, plasma membrane	30.73	53.17
GSMUA_Achr8P21510_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	59.74	51.99
Os03t0326200-01	Rice	plastid	30.97	48.53
VIT_16s0013g01900.t01	Wine grape	mitochondrion	4.4	39.71
VIT_14s0066g01180.t01	Wine grape	mitochondrion	33.82	35.17
VIT_17s0000g04450.t01	Wine grape	mitochondrion, plasma membrane	33.17	33.78
VIT_01s0011g02480.t01	Wine grape	mitochondrion	32.36	33.47
VIT_09s0002g01730.t01	Wine grape	mitochondrion	32.27	32.22
VIT_00s0125g00410.t01	Wine grape	mitochondrion, plasma membrane	32.11	32.03
VIT_13s0074g00480.t01	Wine grape	plasma membrane	14.34	29.09
VIT_18s0075g00840.t01	Wine grape	cytosol	3.34	27.89
VIT_00s0188g00070.t01	Wine grape	cytosol, nucleus, peroxisome	5.22	26.78
VIT_00s0189g00030.t01	Wine grape	extracellular, mitochondrion, plasma membrane	30.81	12.29

Protein Annotations

EntrezGene:100254060	wikigene:100254060	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB52145	ProteinID:CCB52145.1
ncoils:Coil	UniProt:F6HIX9	EMBL:FN595767	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100254060	wikigene:LOC100254060	InterPro:P-type_ATPase_IV
InterPro:P-type_ATPase_N	PFAM:PF00122	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212	PRINTS:PR00119
PRINTS:PR00121	ScanProsite:PS00154	PANTHER:PTHR24092	PANTHER:PTHR24092:SF74	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652
TMHMM:TMhelix	UniParc:UPI0002108AC7	ArrayExpress:VIT_13s0047g01210	EnsemblPlantsGene:VIT_13s0047g01210	EnsemblPlants:VIT_13s0047g01210.t01	RefSeq:XP_002271241
RefSeq:XP_002271241.2	RefSeq:XP_019080023.1	SEG:seg	:	:	:

Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HIX9]

Coordinates

chr13:+:18282475..18291645

Molecular Weight (calculated)

137463.0 Da

IEP (calculated)

7.717

GRAVY (calculated)

-0.015

Length

1227 amino acids

Sequence
(BLAST)

0001: MASNRPLLIP SPRTPAVEDL PTIPIFADLA KPNSENPKLV MRMDSNNPLG NHTNTEPTLN SSSRRSISSV QSRASRGNSV SGKSVSGVSF DLSGSRPVRH
0101: GSRGAESDGF SMSQRELSDE DARLIYINDP EKSNERYEFA GNTVRTGKYS ILTFLPRNLF EQFHRIAYIY FLVIAILNQL PQLAVFGRTA SVLPLAIVLL
0201: VTAIKDAYED WRRHRSDQIE NNRMARVLGD DGFQEKKWKN IRVGEIIKIS ANDTLPCDIV LLSTSDPTGV AYVQTINLDG ESNLKTRYAR QETISRMSQK
0301: ERMSGLIKCE KPSRNIYGFQ GNMEVDGKRL SLGPSNIVLR GCELKNTTWA IGVAVYCGRE TKAMLNNSGA PSKRSRLETH MNRETLFLSA FLISLCTIVS
0401: VLAAVWLRRH RDELDYLPYY RRKSYAKGKP ENYNYYGWGW EIVFTFLMSV IVFQIMIPIS LYISMELVRV GQAYFMIQDN KLYDEASNSR FQCRALNINE
0501: DLGQIKYVFS DKTGTLTENK MEFQCASIWG VDYRGGTTCM QGDGYSVQVD GQVWRPKMKV KVDLELERLS KSGKQTEEGK HIHDFFLALA ACNTIVPIVV
0601: DTSDPAVRLI DYQGESPDEQ ALVYAAAAYG FMLMERTSGH IVIDVHGERQ RFDVLGLHEF DSDRKRMSVI LGCPDNTVKV FVKGADTSMF SIIDKFSNMN
0701: IIRATESHLH NFSSLGLRTL VVGMRDLNGS EFEQWKFAFE TASTALIGRA ALLRKIASNI ENNLSILGAS GIEDKLQQGV PEAIESLRMA GIKVWVLTGD
0801: KQETAISIGY SSKLLTSNMT RIIINNNSKE SCKKSLEDAI VTSKTLMTQS GISQNTEGIS GTAETPVALI IDGTSLVYVL DGELEEQLFQ LASGCSVVLC
0901: CRVAPLQKAG IVALIKKRTD DMTLAIGDGA NDVSMIQMAD VGIGISGQEG RQAVMASDFA MGQFRFLVPL LLVHGHWNYQ RMGYMILYNF YRNAVFVLVL
1001: FWYVLYTCFS VTTAINEWSS VLYSVIYSSV PTIVVAILDK DLSSRTLLKH PQLYGSGHRQ ECYNSKLFWL TMLDTVWQSG VIFFVPLFAY WSSVVDGSSI
1101: GDLWTLAVVI LVNIHLAMDV IRWTWIVHAA IWGSIVATCI CVIIIDAIPS LRGYWAIFHI AKTGSFWLCL LGILVAAVLP RFVVKVLYQY FTPCDVQIAR
1201: EAEKFGYSRE LEGMQIEMNT ILEPRQR

Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)

0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR

Arabidopsis Description

ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.