Factsheet for VIT_00s0188g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0120800-01	Rice	cytosol	20.92	41.67
VIT_18s0075g00840.t01	Wine grape	cytosol	16.74	27.21
GSMUA_AchrUn_...	Banana	cytosol	70.71	25.04
Zm00001d025156_P001	Maize	plasma membrane	34.31	25.0
Solyc11g017170.1.1	Tomato	plasma membrane	76.99	22.63
KRH26968	Soybean	cytosol, peroxisome, plasma membrane	80.33	17.34
KRH22363	Soybean	plasma membrane	79.92	17.33
CDX96956	Canola	plasma membrane	74.9	17.28
Bra033730.1-P	Field mustard	plasma membrane	75.31	16.33
CDY22301	Canola	plasma membrane	75.31	16.33
CDX94764	Canola	plasma membrane	74.9	16.24
AT5G44240.1	Thale cress	plasma membrane	76.57	16.07
TraesCS2B01G230600.4	Wheat	plasma membrane	73.64	15.93
TraesCS2A01G203300.4	Wheat	plasma membrane	73.22	15.92
HORVU2Hr1G040180.5	Barley	plasma membrane	72.8	15.75
Os11t0446500-00	Rice	plasma membrane	72.38	15.67
TraesCS2D01G212400.1	Wheat	plasma membrane	72.8	15.54
KXG36585	Sorghum	plasma membrane	71.55	15.5
HORVU2Hr1G067870.14	Barley	peroxisome	64.44	15.25
Zm00001d021972_P002	Maize	plasma membrane	70.71	14.51
TraesCS2A01G276800.1	Wheat	plasma membrane	64.44	14.38
TraesCS2D01G276300.1	Wheat	plasma membrane	63.6	14.19
TraesCS2B01G294800.1	Wheat	plasma membrane	63.6	14.0
OQU81316	Sorghum	plasma membrane	60.67	13.43
Os05t0335401-01	Rice	cytosol	7.53	11.76
VIT_13s0074g00480.t01	Wine grape	plasma membrane	24.27	9.59
PGSC0003DMT400023828	Potato	plasma membrane	24.27	7.69
VIT_00s0125g00410.t01	Wine grape	mitochondrion, plasma membrane	28.87	5.61
VIT_14s0066g01180.t01	Wine grape	mitochondrion	27.62	5.59
VIT_01s0011g02480.t01	Wine grape	mitochondrion	27.62	5.56
VIT_13s0047g01210.t01	Wine grape	plasma membrane	26.78	5.22
VIT_08s0058g01400.t01	Wine grape	plasma membrane	25.52	5.17
VIT_17s0000g04450.t01	Wine grape	mitochondrion, plasma membrane	23.85	4.73
VIT_09s0002g01730.t01	Wine grape	mitochondrion	23.85	4.64
GSMUA_Achr4P31850_001	Banana	cytosol	1.67	2.38
VIT_00s0189g00030.t01	Wine grape	extracellular, mitochondrion, plasma membrane	27.2	2.11
GSMUA_Achr4P31840_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	1.67	0.94
Solyc11g017190.1.1	Tomato	golgi, peroxisome, plasma membrane	1.26	0.86
Zm00001d025153_P011	Maize	plasma membrane	2.09	0.78
VIT_16s0013g01900.t01	Wine grape	mitochondrion	0.0	0.0

Protein Annotations

MapMan:24.1.2.4.1.1	MapMan:5.8.2.1.1.1	ProteinID:CCB62787	ProteinID:CCB62787.1	UniProt:F6I776	EMBL:FN596767
GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004012	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016787	GO:GO:0045332	InterPro:P-type_ATPase_IV	PANTHER:PTHR24092	PANTHER:PTHR24092:SF19	TMHMM:TMhelix
UniParc:UPI0002108EE8	ArrayExpress:VIT_00s0188g00070	EnsemblPlantsGene:VIT_00s0188g00070	EnsemblPlants:VIT_00s0188g00070.t01	SEG:seg	:

Description

No Description!

Coordinates

chrUn:+:9429658..9430692

Molecular Weight (calculated)

26668.5 Da

IEP (calculated)

5.133

GRAVY (calculated)

0.121

Length

239 amino acids

Sequence
(BLAST)

001: MRVISSACMS IDFGLLHKTK GVIECPIPDK DIRRFDTNLR NETKLDMSRG IPESKLTAVD AMIDKLIGAI FVFQILVVIV LGTAGNVWKD TEAVKQWYVL
101: YSKEGPWDEL LVIPLRFELL CSIMIPISIK VSLDLVRSLY AKLIDWDNQM IDQETSVPSH ATNTAISEDL GQIKYILTDK TETLAENRMI FRRCCIGGIF
201: YGNESGDASK DVELLNAVSS GSPYDIRFVA VMAKSSAHA

Best Arabidopsis Sequence Match ( AT5G44240.1 )
(BLAST)

0001: MNLEFCFLQA YSILRDFRRN DKLIDVFEFL PDLDRFVYIN DDEASKELCC DNRISNRKYT LWNFLPKNLW EQFSRFMNQY FLLIACLQLW SLITPVNPAS
0101: TWGPLIFIFA VSASKEAWDD YHRYLSDKKA NEKEVWIVKQ GIKKHIQAQD IQVGNIVWLR ENDEVPCDLV LLGTSDPQGV CYVETAALDG ETDLKTRVIP
0201: SACVGIDLEL LHKMKGVIEC PVPDKDIRRF DANMRLFPPF IDNDVCSLTI KNTLLQSCYL RNTEWACGVS VYTGNQTKLG MSRGIAEPKL TAMDAMIDKL
0301: TGAIFVFQIV VVLVLGIAGN VWKDTEARKQ WYVQYPEEAP WYELLVIPLR FELLCSIMIP ISIKVSLDLV KGLYAKFIEW DVEMIDQETG TASYAANTAI
0401: SEDLGQVEYI LTDKTGTLTD NKMIFRRCCI GGIFYGNENG DALKDAQLLN AITSGSTDVI RFLTVMAICN TVLPVQSKAG DIVYKAQSQD EDALVIAASK
0501: LHMVFVGKNA NLLEIRFNGS VIRYEVLEIL EFTSDRKRMS VVVKDCQNGK IILLSKGADE AILPYARAGQ QTRTIGDAVE HYSQLGLRTL CLAWRELEEN
0601: EYLEWSVKFK EASSLLVDRE WRIAEVCQRL EHDLYILGVT AIEDRLQDGV PETIETLRKA GINFWMLTGD KQNTAIQIAL SCNFISPEPK GQLLMIDGKT
0701: EEDVSRSLER VLLTMRITAS EPKDVAFVID GWALEIALKH HRKDFVELAI LSRTAICCRV TPSQKAQLVE ILKSCDYRTL AIGDGGNDVR MIQQADIGVG
0801: ISGREGLQAA RAADYSIGRF RFLKRLILVH GRYSYNRTAF LSQYSFYKSL LICFIQIFFS FISGVSGTSL FNSVSLMAYN VFYTSVPVLV SVIDKDLSEA
0901: SVMQHPQILF YCQAGRLLNP STFAGWFGRS LFHAIIVFVI TIHAYAYEKS EMEELGMVAL SGCIWLQAFV VAQETNSFTV LQHLSIWGNL VGFYAINFLF
1001: SAIPSSGMYT IMFRLCSQPS YWITMFLIVG AGMGPIFALK YFRYTYRPSK INILQQAERM GGPILTLGNI ETQPRTIEKD LSPISITQPK NRSPVYEPLL
1101: SDSPNATRRS FGPGTPFEFF QSQSRLSSSS GYTRNCKDN

Arabidopsis Description

ALA2Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4K8T6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.