Factsheet for PGSC0003DMT400023828

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
peroxisome 1
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g017190.1.1	Tomato	golgi, peroxisome, plasma membrane	43.77	95.1
GSMUA_Achr4P31840_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	46.68	82.63
VIT_18s0075g00840.t01	Wine grape	cytosol	13.0	66.67
Zm00001d025153_P011	Maize	plasma membrane	56.23	66.04
KRH26968	Soybean	cytosol, peroxisome, plasma membrane	84.75	57.72
KRH22363	Soybean	plasma membrane	83.69	57.26
CDX96956	Canola	plasma membrane	77.85	56.66
Bra033730.1-P	Field mustard	plasma membrane	82.76	56.62
CDY22301	Canola	plasma membrane	82.63	56.53
CDX94764	Canola	plasma membrane	82.23	56.26
AT5G44240.1	Thale cress	plasma membrane	83.02	54.96
Os05t0335401-01	Rice	cytosol	11.01	54.25
KXG36585	Sorghum	plasma membrane	73.87	50.5
TraesCS2B01G230600.4	Wheat	plasma membrane	73.74	50.32
HORVU2Hr1G040180.5	Barley	plasma membrane	73.47	50.14
Os11t0446500-00	Rice	plasma membrane	73.34	50.09
TraesCS2A01G203300.4	Wheat	plasma membrane	72.94	50.05
TraesCS2D01G212400.1	Wheat	plasma membrane	73.61	49.55
Zm00001d021972_P002	Maize	plasma membrane	73.34	47.47
TraesCS2A01G276800.1	Wheat	plasma membrane	63.26	44.54
OQU81316	Sorghum	plasma membrane	63.4	44.26
TraesCS2D01G276300.1	Wheat	plasma membrane	62.86	44.26
HORVU2Hr1G067870.14	Barley	peroxisome	58.49	43.66
TraesCS2B01G294800.1	Wheat	plasma membrane	62.86	43.65
GSMUA_AchrUn_...	Banana	cytosol	34.35	38.37
PGSC0003DMT400080209	Potato	plasma membrane	28.65	29.27
Os09t0120800-01	Rice	cytosol	4.64	29.17
VIT_00s0188g00070.t01	Wine grape	cytosol, nucleus, peroxisome	7.69	24.27
PGSC0003DMT400001292	Potato	cytosol	31.43	22.38
PGSC0003DMT400064690	Potato	mitochondrion	32.1	20.25
PGSC0003DMT400070787	Potato	plastid	30.5	19.64
PGSC0003DMT400019314	Potato	mitochondrion	31.03	19.63
PGSC0003DMT400083890	Potato	mitochondrion	30.37	18.97
PGSC0003DMT400006627	Potato	mitochondrion	30.37	18.93
PGSC0003DMT400012383	Potato	cytosol	30.24	18.8
PGSC0003DMT400054638	Potato	plasma membrane	30.24	18.33
GSMUA_Achr4P31850_001	Banana	cytosol	1.06	4.76
PGSC0003DMT400053816	Potato	cytosol, plasma membrane, plastid	1.19	4.46
Zm00001d025156_P001	Maize	plasma membrane	1.33	3.05

Protein Annotations

MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004012
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0008150
GO:GO:0009506	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
UniProt:M1AJ15	InterPro:P-type_ATPase_IV	PFAM:PF08282	PFAM:PF13246	PFAM:PF16212	EnsemblPlantsGene:PGSC0003DMG400009218
PGSC:PGSC0003DMG400009218	EnsemblPlants:PGSC0003DMT400023828	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR24092	PANTHER:PTHR24092:SF19
InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI000294EB01	SEG:seg	:	:

Description

Haloacid dehalogenase-like hydrolase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009218]

Coordinates

chr11:-:8886460..8939223

Molecular Weight (calculated)

84689.5 Da

IEP (calculated)

7.574

GRAVY (calculated)

0.049

Length

754 amino acids

Sequence
(BLAST)

001: MRWLIQKLVL HPMRQTISED LGQVEYILTD KTGTLTENKM IFKRCCISGT FYGNENGDCL KDPELLQAVA SGSPDAIRFL IVMAICNTVV PVQSKAGAVS
101: YKAQSQDEEA LVRAAARLNM VFLEKKGNIL DINFNASLVQ YEVLDTLEFT SERKRMSVVV RDCQNGNIIL LSKGADEAIL PHAHAGQQTR IFAEAAEQYA
201: QLGLRTLCLA WRDLEEEEYH EWSLLFKEAN SSLVDREWRV AEVCQRIEHG LEIIGVAAIE DRLQDAVPET IETLRKAGIN FWMLTGDKQN TAIQIARSCN
301: FVSPEPKGQL LLINGRTEDE VGQSLERVLL TMRITNAEPK DVAFVVDGWA LEIVLKHYRK AFTELAILSR TAICCRVTPS QKAQLVELLK SCEYRTLAIG
401: DGGNDVRMIQ QADIGVGISG REGLQAARAA DYSIGKFRFL KRLILVHGRY SYNRTAFLSQ YSFYKSLLIC FIQIFFSFIS GVSGTSLFNS VSLMAYNVFY
501: TSVPVLVSVL DKDLSERTVM QHPQILFYCQ AGRLLNPSTF AGWFGRSLFH AIVVFVITIH AYAFEKSEME EASMVALSGC IWLQAFVVAL ETNSFTILQH
601: IAIWGNLVAF YVINWIVSAF PSSGLYTIMF RLCRQPSYWI TMFIIVAAGM GPVLALKYFR YTYRSSKINI LQQAERMGGP ILSLGNIEPQ PRSLDKDVSP
701: LSISQPKNRT SVYEPLLSDS PSATRRSFGP GAPFDFFQSQ ARLSSNYTRN CKDN

Best Arabidopsis Sequence Match ( AT5G44240.2 )
(BLAST)

0001: MKRFVYINDD EASKELCCDN RISNRKYTLW NFLPKNLWEQ FSRFMNQYFL LIACLQLWSL ITPVNPASTW GPLIFIFAVS ASKEAWDDYH RYLSDKKANE
0101: KEVWIVKQGI KKHIQAQDIQ VGNIVWLREN DEVPCDLVLL GTSDPQGVCY VETAALDGET DLKTRVIPSA CVGIDLELLH KMKGVIECPV PDKDIRRFDA
0201: NMRLFPPFID NDVCSLTIKN TLLQSCYLRN TEWACGVSVY TGNQTKLGMS RGIAEPKLTA MDAMIDKLTG AIFVFQIVVV LVLGIAGNVW KDTEARKQWY
0301: VQYPEEAPWY ELLVIPLRFE LLCSIMIPIS IKVSLDLVKG LYAKFIEWDV EMIDQETGTA SYAANTAISE DLGQVEYILT DKTGTLTDNK MIFRRCCIGG
0401: IFYGNENGDA LKDAQLLNAI TSGSTDVIRF LTVMAICNTV LPVQSKAGDI VYKAQSQDED ALVIAASKLH MVFVGKNANL LEIRFNGSVI RYEVLEILEF
0501: TSDRKRMSVV VKDCQNGKII LLSKGADEAI LPYARAGQQT RTIGDAVEHY SQLGLRTLCL AWRELEENEY LEWSVKFKEA SSLLVDREWR IAEVCQRLEH
0601: DLYILGVTAI EDRLQDGVPE TIETLRKAGI NFWMLTGDKQ NTAIQIALSC NFISPEPKGQ LLMIDGKTEE DVSRSLERVL LTMRITASEP KDVAFVIDGW
0701: ALEIALKHHR KDFVELAILS RTAICCRVTP SQKAQLVEIL KSCDYRTLAI GDGGNDVRMI QQADIGVGIS GREGLQAARA ADYSIGRFRF LKRLILVHGR
0801: YSYNRTAFLS QYSFYKSLLI CFIQIFFSFI SGVSGTSLFN SVSLMAYNVF YTSVPVLVSV IDKDLSEASV MQHPQILFYC QAGRLLNPST FAGWFGRSLF
0901: HAIIVFVITI HAYAYEKSEM EELGMVALSG CIWLQAFVVA QETNSFTVLQ HLSIWGNLVG FYAINFLFSA IPSSGMYTIM FRLCSQPSYW ITMFLIVGAG
1001: MGPIFALKYF RYTYRPSKIN ILQQAERMGG PILTLGNIET QPRTIEKDLS PISITQPKNR SPVYEPLLSD SPNATRRSFG PGTPFEFFQS QSRLSSSSGY
1101: TRNCKDN

Arabidopsis Description

ALA2Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4K8T6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.