Factsheet for PGSC0003DMT400006627

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g121810.2.1	Tomato	mitochondrion	98.43	98.43
PGSC0003DMT400083890	Potato	mitochondrion	80.74	80.94
PGSC0003DMT400012383	Potato	cytosol	79.83	79.64
VIT_09s0002g01730.t01	Wine grape	mitochondrion	75.87	74.69
GSMUA_Achr7P09160_001	Banana	mitochondrion	63.47	73.42
Os06t0565900-01	Rice	plasma membrane	39.26	72.85
KRH23275	Soybean	mitochondrion	73.64	72.79
KRH44107	Soybean	mitochondrion	73.97	72.71
KRH10041	Soybean	mitochondrion	73.47	72.63
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	65.7	72.6
AT1G17500.1	Thale cress	mitochondrion, plasma membrane	72.48	72.12
Bra030991.1-P	Field mustard	mitochondrion	72.56	72.09
CDY21747	Canola	mitochondrion, plasma membrane	72.48	72.0
KRH47082	Soybean	mitochondrion	73.22	71.97
CDX81828	Canola	mitochondrion, plasma membrane	72.31	71.84
GSMUA_Achr7P13550_001	Banana	mitochondrion, plasma membrane	63.14	71.47
Bra016040.1-P	Field mustard	mitochondrion	72.15	71.21
CDX96429	Canola	mitochondrion	72.07	71.13
TraesCS7D01G362300.1	Wheat	mitochondrion	71.16	70.75
TraesCS7A01G360700.2	Wheat	mitochondrion	71.07	70.67
CDY55204	Canola	mitochondrion	71.49	70.04
CDX72937	Canola	mitochondrion, plasma membrane	71.07	70.03
AT1G72700.2	Thale cress	mitochondrion, plasma membrane	71.07	70.03
AT3G13900.1	Thale cress	mitochondrion, plasma membrane	71.9	69.99
Zm00001d046194_P003	Maize	mitochondrion, plasma membrane	71.07	69.98
CDY49858	Canola	mitochondrion, plasma membrane	68.1	69.95
OQU76591	Sorghum	mitochondrion, plasma membrane	70.5	69.86
Zm00001d036968_P010	Maize	mitochondrion, plasma membrane	70.17	69.7
GSMUA_Achr2P19460_001	Banana	mitochondrion, plasma membrane	57.52	69.67
HORVU7Hr1G087590.10	Barley	mitochondrion	70.66	69.57
CDY53865	Canola	mitochondrion, plasma membrane	68.1	69.42
GSMUA_Achr6P00940_001	Banana	mitochondrion, plasma membrane	61.65	69.33
Bra008042.1-P	Field mustard	mitochondrion, plasma membrane	68.02	69.28
CDY08221	Canola	mitochondrion	70.25	69.22
AT1G54280.3	Thale cress	mitochondrion	70.83	69.11
CDY10603	Canola	mitochondrion	70.91	69.08
CDY26129	Canola	mitochondrion	70.08	69.06
CDY02467	Canola	mitochondrion	70.83	69.0
TraesCS7B01G267000.2	Wheat	mitochondrion	71.16	68.61
Bra014364.1-P	Field mustard	mitochondrion	70.0	68.42
VIT_13s0074g00480.t01	Wine grape	plasma membrane	31.82	63.64
PGSC0003DMT400054638	Potato	plasma membrane	57.93	56.35
PGSC0003DMT400019314	Potato	mitochondrion	55.29	56.12
PGSC0003DMT400064690	Potato	mitochondrion	55.12	55.82
PGSC0003DMT400001292	Potato	cytosol	48.51	55.43
PGSC0003DMT400053816	Potato	cytosol, plasma membrane, plastid	9.09	54.46
PGSC0003DMT400070787	Potato	plastid	32.15	33.22
PGSC0003DMT400080209	Potato	plasma membrane	19.83	32.52
PGSC0003DMT400023828	Potato	plasma membrane	18.93	30.37

Protein Annotations

EntrezGene:102582700	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	UniProt:M0ZRQ8	InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N	PFAM:PF13246	PFAM:PF16209
PFAM:PF16212	EnsemblPlantsGene:PGSC0003DMG400002578	PGSC:PGSC0003DMG400002578	EnsemblPlants:PGSC0003DMT400006627	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF137	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI000295E4D0
RefSeq:XP_006342965.1	SEG:seg	:	:	:	:

Description

Phospholipid-transporting ATPase [Source:PGSC_GENE;Acc:PGSC0003DMG400002578]

Coordinates

chr3:+:61048154..61053183

Molecular Weight (calculated)

136732.0 Da

IEP (calculated)

6.698

GRAVY (calculated)

-0.074

Length

1210 amino acids

Sequence
(BLAST)

0001: MAGGKIRAKI RRSSIYTFGC RKRPPTSEEE SPHELGPGSS RVVHCNKPQL HDKKPLKYCT NFISTTKYNV ITFLPKALFE QFRRVANLYF LLCAILTLTT
0101: DLSPFDPFST VAPLVFVVGL SMAKEGLEDS KRFLQDMNVN RRKASVHSID GVFEDKPWMK VRVGDVLKVK KDQFFPCDLL LLSSSYEDGI CYVETMNLDG
0201: ETNLKVRRAL EVTLPLDDDE AFKEFSATIK CEDPNPSLYT FVGNLEYDRQ VYPLDPSQIL LRDSKLRNTG YVYGVVVFTG HDSKVMQNST KSPSKRSRVE
0301: LQMDKIIYLL FALLLLISCV SSIGFALNVK FDMPKWWYLQ PFDNTNNSTD LSEPELSGLL HLLTALILYG YLIPISLYVS IEVVKVLQAS FINQDISMYD
0401: DETGTPAQAR TSNLNEELGQ VDTILSDKTG TLTCNQMDFL KCSIAGLQYG TRASDVELAA AKQLAEDMGG QDLEPSQTTD GGNGGVQLET VVTSKDERNL
0501: KPAIKGFSFE DSRLMKGCWM KEPNTDVILL FYRILAICHA AIPEHNEETG GFNYESESPD EVSFLVAARE FGFEFFKRTQ ASVFVKERYP SFQDPIEKEY
0601: KILNLLDFTS KRKRMSVIIR DDTGQILLLC KGADSIIYDR LAKNGRKFEE AMTKHLNEYG ESGLRTLVLA YKKLDEAEYS TWNEEFTKAK TSIGGDRDVV
0701: LERVSDMMEK DLILVGATAV EDKLQKGVPQ CIDKLAQAGL KIWVLTGDKM ETAINIGYAC SLLRQGMKQI CITTVDADSV AQDSKQATKE NILKQITNAS
0801: QMVKLEKDPH AAFALIIDGK TLSYALEDDT KLQFLNLAVD CASVICCRVS PRQKALVTRL VKEGTGKITL GIGDGANDVG MIQEADIGVG ISGAEGMQAV
0901: MASDFAVAQF RFLERLLVVH GHWCYKRIAQ MICYFFYKNI AFGLTLFFFE VYAGFSGQSV YNDMYMILFN VLLTSLPVIA LGVFEQDVSS EVCLQFPALY
1001: QQGPKNLFFD WYRILGWLSN GIYTSLVIFF LNVLFFYNQA FHSEGQTADL AILGTSMFTC VIWAVNCQIA LTMSHFTWIQ HVFIWGSIAV WYLSVVLYGE
1101: IFPGYAKYAF RIMQEHLGPA PIFWCTTLLV TLACILPYLA HVAFQRAFHP RDHHIIQEIK YYKKDVQDER MWKRQQTKAR QKTNIGFTAR VDAKIRNLKG
1201: RLQKKHSQME

Best Arabidopsis Sequence Match ( AT1G17500.1 )
(BLAST)

0001: MARGRIRSKL RLSHIYTFGC LRPSADEGQD PHPIQGPGFS RTVYCNQPHM HKKKPLKYRS NYVSTTRYNL ITFFPKCLYE QFHRAANFYF LVAAILSVFP
0101: LSPFNKWSMI APLVFVVGLS MLKEALEDWS RFMQDVKINA SKVYVHKSDG EFRRRKWKKI SVGDIVKVEK DGFFPADLLL LSSSYEDGIC YVETMNLDGE
0201: TNLKVKRSLE VTLSLDDYDS FKDFTGIIRC EDPNPSLYTF VGNLEYERQI FPLDPSQILL RDSKLRNTPY VYGVVVFTGH DTKVMQNSTK SPSKRSRIEK
0301: TMDYIIYTLL VLLILISCIS SSGFAWETKF HMPKWWYLRP EEPENLTNPS NPVYAGFVHL ITALLLYGYL IPISLYVSIE VVKVLQASFI NKDLHMYDSE
0401: SGVPAHARTS NLNEELGQVD TILSDKTGTL TCNQMDFLKC SIAGTSYGVR SSEVEVAAAQ QMAVDLDEHG EVSSRTSTPR AQARDIEVES SITPRIPIKG
0501: FGFEDIRLMD GNWLREPHTD DILLFFRILA ICHTAIPELN EETGKYTYEA ESPDEASFLT AASEFGFVFF KRTQSSVYVH ERLSHSGQTI EREYKVLNLL
0601: DFTSKRKRMS VVVRDEEGQI LLLCKGADSI IFERLAKNGK VYLGPTTKHL NEYGEAGLRT LALSYRKLDE EEYSAWNAEF HKAKTSIGSD RDELLERISD
0701: MIEKDLILVG ATAVEDKLQK GVPQCIDKLA QAGLKLWVLT GDKMETAINI GYSCSLLRQG MKQICITVVN SEGASQDAKA VKDNILNQIT KAVQMVKLEK
0801: DPHAAFALII DGKTLTYALE DEMKYQFLAL AVDCASVICC RVSPKQKALV TRLVKEGTGK ITLAIGDGAN DVGMIQEADI GVGISGVEGM QAVMASDFSI
0901: AQFRFLERLL VVHGHWCYKR IAQMICYFFY KNIAFGLTLF YFEAFTGFSG QSVYNDYYLL LFNVVLTSLP VIALGVFEQD VSSEICLQFP ALYQQGKKNL
1001: FFDWYRILGW MGNGVYSSLV IFFLNIGIIY EQAFRVSGQT ADMDAVGTTM FTCIIWAVNV QIALTVSHFT WIQHVLIWGS IGLWYLFVAL YGMMPPSLSG
1101: NIYRILVEIL APAPIYWIAT FLVTVTTVLP YFAHISFQRF LHPLDHHIIQ EIKYYKRDVE DRRMWTRERT KAREKTKIGF TARVDAKIRH LRSKLNKKQS
1201: NMSQFSTQDT MSPRSV

Arabidopsis Description

ALA4Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178W5K3]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.