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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
YLoc:plasma membrane
plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P09160_001 Banana mitochondrion 81.75 50.96
OQU76591 Sorghum mitochondrion, plasma membrane 93.71 50.04
Zm00001d036968_P010 Maize mitochondrion, plasma membrane 93.25 49.92
Os06t0488600-01 Rice plasma membrane 24.39 49.84
Zm00001d046194_P003 Maize mitochondrion, plasma membrane 93.1 49.39
GSMUA_Achr10P... Banana mitochondrion, plasma membrane 80.98 48.22
TraesCS7A01G360700.2 Wheat mitochondrion 89.88 48.15
TraesCS7D01G362300.1 Wheat mitochondrion 89.72 48.07
HORVU7Hr1G087590.10 Barley mitochondrion 90.49 48.01
GSMUA_Achr7P13550_001 Banana mitochondrion, plasma membrane 76.53 46.68
TraesCS7B01G267000.2 Wheat mitochondrion 89.72 46.61
Os08t0379200-01 Rice plasma membrane 15.64 44.35
GSMUA_Achr2P19460_001 Banana mitochondrion, plasma membrane 65.8 42.94
GSMUA_Achr6P00940_001 Banana mitochondrion, plasma membrane 70.71 42.84
VIT_09s0002g01730.t01 Wine grape mitochondrion 78.99 41.9
KRH23275 Soybean mitochondrion 78.07 41.59
KRH10041 Soybean mitochondrion 77.3 41.18
KRH44107 Soybean mitochondrion 76.99 40.78
KRH47082 Soybean mitochondrion 76.99 40.78
Bra016040.1-P Field mustard mitochondrion 76.07 40.46
CDX96429 Canola mitochondrion 75.92 40.38
Bra030991.1-P Field mustard mitochondrion 75.31 40.31
CDY21747 Canola mitochondrion, plasma membrane 75.31 40.31
Solyc06g062780.2.1 Tomato mitochondrion 74.85 40.23
CDX81828 Canola mitochondrion, plasma membrane 75.15 40.23
AT1G17500.1 Thale cress mitochondrion, plasma membrane 75.0 40.21
PGSC0003DMT400083890 Potato mitochondrion 74.23 40.1
PGSC0003DMT400012383 Potato cytosol 74.54 40.07
Solyc12g044920.1.1 Tomato mitochondrion 74.08 40.02
CDX72937 Canola mitochondrion, plasma membrane 75.31 39.98
Solyc03g121810.2.1 Tomato mitochondrion 73.47 39.59
Os10t0412000-01 Rice plasma membrane 38.96 39.56
PGSC0003DMT400006627 Potato mitochondrion 72.85 39.26
AT1G72700.2 Thale cress mitochondrion, plasma membrane 73.93 39.25
CDY55204 Canola mitochondrion 74.08 39.11
CDY08221 Canola mitochondrion 73.62 39.09
CDY26129 Canola mitochondrion 73.47 39.01
AT1G54280.3 Thale cress mitochondrion 74.08 38.95
Bra014364.1-P Field mustard mitochondrion 73.62 38.77
CDY02467 Canola mitochondrion 73.77 38.73
CDY10603 Canola mitochondrion 73.62 38.65
AT3G13900.1 Thale cress mitochondrion, plasma membrane 73.47 38.54
CDY49858 Canola mitochondrion, plasma membrane 68.71 38.03
CDY53865 Canola mitochondrion, plasma membrane 68.71 37.74
Bra008042.1-P Field mustard mitochondrion, plasma membrane 68.56 37.63
Os03t0334700-01 Rice plasma membrane 32.36 24.79
Os03t0326000-01 Rice plasma membrane 7.52 22.07
Os05t0335401-01 Rice cytosol 4.91 20.91
Os01t0277600-00 Rice plasma membrane 33.9 18.81
Os05t0100600-02 Rice peroxisome, plasma membrane 14.26 18.56
Os11t0446500-00 Rice plasma membrane 28.83 17.03
VIT_13s0074g00480.t01 Wine grape plasma membrane 14.42 15.54
Os03t0326200-01 Rice plastid 2.76 2.3
Os03t0326100-01 Rice peroxisome 1.07 1.46
Os10t0412050-00 Rice cytosol, mitochondrion, peroxisome 0.0 0.0
Os09t0120800-01 Rice cytosol 0.0 0.0
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000MapMan:5.8.2.1.1.1InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_N
ProteinID:BAF19805.1ProteinID:BAS98281.1GO:GO:0000139GO:GO:0000166GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0004012GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005802GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015914GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0045332GO:GO:0048194InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299EnsemblPlantsGene:Os06g0565900EnsemblPlants:Os06t0565900-01InterPro:P-type_ATPase_IVPFAM:PF13246
PFAM:PF16212PANTHER:PTHR24092PANTHER:PTHR24092:SF137InterPro:P_typ_ATPaseInterPro:P_typ_ATPase_cUniProt:Q0DBG8
SUPFAM:SSF56784SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelix
UniParc:UPI0000E12863:::::
Description
Similar to Potential phospholipid-transporting ATPase 4 (EC 3.6.3.1) (Aminophospholipid flippase 4). (Os06t0565900-01)
Coordinates
chr6:+:21811138..21815337
Molecular Weight (calculated)
73489.5 Da
IEP (calculated)
7.940
GRAVY (calculated)
0.099
Length
652 amino acids
Sequence
(BLAST)
001: GAFLVAAREF GFEFFKRTQS SVFVREKFSS SNGPVEREFK ILNLLEFNSK RKRMSVILKD EDGQILLFCK GADSIIFDRL AKNGRMIEAD TSKHLNDYGE
101: AGLRTLALSY RVLDESEYSS WNAEFLKAKT SIGPDRELQL ERVSELIERD LILVGATAVE DKLQSGVPQC IDRLAQAGLK IWVLTGDKME TAINIGYACS
201: LLRQGMRRIC LSIPTDDQVA QDANKAAKES LMSQIANGSQ MVKLEKDPDA AFALVIDGKA LTFALEDDMK HMFLNLAIEC ASVICCRVSP KQKALVTRLV
301: KEGIGKTTLA IGDGANDVGM IQEADIGVGI SGVEGMQAVM ASDFSISQFR FLERLLVVHG HWCYKRIAQM ICYFFYKNIA FGLTIFYFEA FAGFSGQSVY
401: DDWFMLLFNV VLTSLPVISL GVFEQDVSSE ICLQFPALYQ QGPRNLFFDW YRILGWMANG LYSSLAIFFL NICIFYDQAI RSGGQTADMA AVGTTMFTCI
501: IWAVNMQIAL TMSHFTWIQH LFVWGSVGTW YLFIIVYGSA LRSRDNYQIL LEVLGPAPLY WAATLLVTAA CNMPYLIHIS YQRLCNPLDH HVIQEIKYLK
601: KDVEDQTMWK RERSKARQRT KIGFTARVDA KIKQIRGKLH KKAPSLTIHT VS
Best Arabidopsis Sequence Match ( AT1G17500.1 )
(BLAST)
0001: MARGRIRSKL RLSHIYTFGC LRPSADEGQD PHPIQGPGFS RTVYCNQPHM HKKKPLKYRS NYVSTTRYNL ITFFPKCLYE QFHRAANFYF LVAAILSVFP
0101: LSPFNKWSMI APLVFVVGLS MLKEALEDWS RFMQDVKINA SKVYVHKSDG EFRRRKWKKI SVGDIVKVEK DGFFPADLLL LSSSYEDGIC YVETMNLDGE
0201: TNLKVKRSLE VTLSLDDYDS FKDFTGIIRC EDPNPSLYTF VGNLEYERQI FPLDPSQILL RDSKLRNTPY VYGVVVFTGH DTKVMQNSTK SPSKRSRIEK
0301: TMDYIIYTLL VLLILISCIS SSGFAWETKF HMPKWWYLRP EEPENLTNPS NPVYAGFVHL ITALLLYGYL IPISLYVSIE VVKVLQASFI NKDLHMYDSE
0401: SGVPAHARTS NLNEELGQVD TILSDKTGTL TCNQMDFLKC SIAGTSYGVR SSEVEVAAAQ QMAVDLDEHG EVSSRTSTPR AQARDIEVES SITPRIPIKG
0501: FGFEDIRLMD GNWLREPHTD DILLFFRILA ICHTAIPELN EETGKYTYEA ESPDEASFLT AASEFGFVFF KRTQSSVYVH ERLSHSGQTI EREYKVLNLL
0601: DFTSKRKRMS VVVRDEEGQI LLLCKGADSI IFERLAKNGK VYLGPTTKHL NEYGEAGLRT LALSYRKLDE EEYSAWNAEF HKAKTSIGSD RDELLERISD
0701: MIEKDLILVG ATAVEDKLQK GVPQCIDKLA QAGLKLWVLT GDKMETAINI GYSCSLLRQG MKQICITVVN SEGASQDAKA VKDNILNQIT KAVQMVKLEK
0801: DPHAAFALII DGKTLTYALE DEMKYQFLAL AVDCASVICC RVSPKQKALV TRLVKEGTGK ITLAIGDGAN DVGMIQEADI GVGISGVEGM QAVMASDFSI
0901: AQFRFLERLL VVHGHWCYKR IAQMICYFFY KNIAFGLTLF YFEAFTGFSG QSVYNDYYLL LFNVVLTSLP VIALGVFEQD VSSEICLQFP ALYQQGKKNL
1001: FFDWYRILGW MGNGVYSSLV IFFLNIGIIY EQAFRVSGQT ADMDAVGTTM FTCIIWAVNV QIALTVSHFT WIQHVLIWGS IGLWYLFVAL YGMMPPSLSG
1101: NIYRILVEIL APAPIYWIAT FLVTVTTVLP YFAHISFQRF LHPLDHHIIQ EIKYYKRDVE DRRMWTRERT KAREKTKIGF TARVDAKIRH LRSKLNKKQS
1201: NMSQFSTQDT MSPRSV
Arabidopsis Description
ALA4Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178W5K3]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.