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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400080209 Potato plasma membrane 57.7 66.53
EER94908 Sorghum cytosol, plastid 90.36 58.66
TraesCS4D01G172400.1 Wheat cytosol, plastid 88.95 57.65
TraesCS4B01G170400.1 Wheat cytosol, plastid 88.95 57.65
TraesCS4A01G134800.2 Wheat cytosol, plastid 88.95 57.65
HORVU4Hr1G050400.3 Barley cytosol, plastid 88.72 57.59
Zm00001d047527_P004 Maize plastid 89.42 56.71
Os03t0326000-01 Rice plasma membrane 12.93 49.55
VIT_08s0058g01400.t01 Wine grape plasma membrane 67.69 48.77
KRH09548 Soybean plasma membrane 66.63 48.34
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane, plastid 70.86 46.56
KRH40719 Soybean cytosol, peroxisome, plasma membrane 68.39 44.87
KRH00430 Soybean cytosol 68.16 44.75
Solyc10g074940.1.1 Tomato cytosol, nucleus, peroxisome, plastid 67.8 43.58
Os01t0277600-00 Rice plasma membrane 53.23 38.55
Os05t0335401-01 Rice cytosol 6.35 35.29
Os06t0565900-01 Rice plasma membrane 24.79 32.36
Os10t0412000-01 Rice plasma membrane 24.32 32.24
Os06t0488600-01 Rice plasma membrane 10.93 29.15
Os08t0379200-01 Rice plasma membrane 7.29 26.96
Os05t0100600-02 Rice peroxisome, plasma membrane 13.63 23.15
Os11t0446500-00 Rice plasma membrane 29.49 22.74
Os09t0120800-01 Rice cytosol 3.06 21.67
Os03t0326100-01 Rice peroxisome 9.99 17.71
Os03t0326200-01 Rice plastid 14.81 16.09
Bra030891.1-P Field mustard plasma membrane 3.76 15.24
Os10t0412050-00 Rice cytosol, mitochondrion, peroxisome 0.0 0.0
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.1110.10MapMan:5.8.2.1.1.1InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_N
ProteinID:BAF11944.1ProteinID:BAS84070.1GO:GO:0000166GO:GO:0000287GO:GO:0003674GO:GO:0003824
GO:GO:0004012GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015914GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016787GO:GO:0045332InterPro:HAD-like_sfInterPro:IPR023299
EnsemblPlantsGene:Os03g0334700EnsemblPlants:Os03t0334700-01InterPro:P-type_ATPase_IVPFAM:PF08282PFAM:PF13246PFAM:PF16212
PRINTS:PR00119ScanProsite:PS00154PANTHER:PTHR24092PANTHER:PTHR24092:SF74InterPro:P_typ_ATPaseInterPro:P_typ_ATPase_c
UniProt:Q0DS44SUPFAM:SSF56784SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652
TMHMM:TMhelixUniParc:UPI0000E12062SEG:seg:::
Description
AMINOPHOSPHOLIPID ATPASE 1Similar to Potential phospholipid-transporting ATPase VB (EC 3.6.3.1). (Os03t0334700-01)
Coordinates
chr3:+:12375718..12380262
Molecular Weight (calculated)
95286.7 Da
IEP (calculated)
5.199
GRAVY (calculated)
0.082
Length
851 amino acids
Sequence
(BLAST)
001: RKDFKFYGIA LEIFFSFLSS VIIFQIMIPI SLYITMELVR VGQSYFMIGD TRMYDSSSGS RFQCRSLNIN EDLGQIRYIF SDKTGTLTQN KMEFHQASIY
101: GKNYGSPLQV TGDSSYEIST TESSRQQGSK SKSGVNVDAE LIALLSQPLV GEERLSAHDF FLTLAACNTV IPVSTENSLD LVNEINEIGR IDYQGESPDE
201: QALVTAASAY GYTLVERTTG HIVVDVQGEK IRLDVLGLHE FDSVRKRMSV VVRFPDNIVK VLVKGADTSM LSILRREDDD ELHNSLHAKI RETTENHLSG
301: YSSEGLRTLV IGSKNLTDAE FGEWQERYEE ASTSMTERSA KLRQAAALVE CNLTLLGATG IEDKLQDGVP EAIESLRQAG IKVWVLTGDK QETAISIGLS
401: CRLLTQNMHL IVINGSSEFE CRRLLADAKA KFGIKSSDSG RDCQDIEHTH NGDVSKLRTS NGHMSESGIH NFELTGVIAS DKSEYSEKVA NFADTDLALV
501: IDGSSLVYIL EKDLESELFD LATSCKVVIC CRVAPLQKAG IVDLIKSRTS DMTLAIGDGA NDVSMIQMAD VGVGICGQEG RQAVMASDFA MGQFRFLKRL
601: LLVHGHWNYQ RIAYMILYNF YRNAVFVLML FWYILHTAYS ATLALTDWSS VFYSLIYTSI PTVVVGILDK DLSHNTLLHY PRLYETGLQN EGYNLTLFWI
701: TMLDTLWQSL VLFYVPFFTY NISTMDIWSM GSLWTIAVVI LVNIHLAMDI QRWVLITHLA VWGSIAATFL CMVLIDSIPI FPNYGTIYNM AASRTYWLSV
801: CLIIVLGLLP RFLCKVIYQT FWPSDIQIAR EAELLKKLPR QLGSRPASDI S
Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)
0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR
Arabidopsis Description
ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.