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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 2
  • plasma membrane 1
  • nucleus 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400080209 Potato plasma membrane 53.63 96.21
VIT_08s0058g01400.t01 Wine grape plasma membrane 66.54 74.6
KRH09548 Soybean plasma membrane 64.73 73.06
KRH40719 Soybean cytosol, peroxisome, plasma membrane 68.81 70.24
KRH00430 Soybean cytosol 68.5 69.98
Os03t0334700-01 Rice plasma membrane 43.58 67.8
EER94908 Sorghum cytosol, plastid 64.8 65.45
TraesCS4A01G134800.2 Wheat cytosol, plastid 63.75 64.28
TraesCS4D01G172400.1 Wheat cytosol, plastid 63.67 64.2
TraesCS4B01G170400.1 Wheat cytosol, plastid 63.67 64.2
HORVU4Hr1G050400.3 Barley cytosol, plastid 63.44 64.07
Zm00001d047527_P004 Maize plastid 64.05 63.19
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane, plastid 60.05 61.39
Solyc01g096930.2.1 Tomato plastid 51.36 58.02
Solyc11g017170.1.1 Tomato plasma membrane 22.05 35.92
Solyc02g086800.2.1 Tomato plasma membrane 31.5 35.49
Solyc04g006940.2.1 Tomato nucleus 31.42 34.9
Solyc01g011100.2.1 Tomato plasma membrane 26.21 34.53
Solyc05g006640.2.1 Tomato plasma membrane, plastid 30.66 33.25
Solyc06g062780.2.1 Tomato mitochondrion 30.44 33.22
Solyc03g121810.2.1 Tomato mitochondrion 30.36 33.22
Solyc02g069430.2.1 Tomato plasma membrane 12.31 33.13
Solyc12g044920.1.1 Tomato mitochondrion 30.14 33.06
Solyc01g011090.2.1 Tomato plastid 6.04 32.13
Solyc02g069420.2.1 Tomato cytosol, mitochondrion, plasma membrane, plastid 18.28 30.14
Solyc12g062510.1.1 Tomato cytosol 2.95 27.27
Solyc11g017190.1.1 Tomato golgi, peroxisome, plasma membrane 6.04 23.05
Bra030891.1-P Field mustard plasma membrane 2.64 16.67
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.1110.10MapMan:5.8.2.1.1.1InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sfGO:GO:0000166GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004012
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015914GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0045332InterPro:HAD-like_sfInterPro:IPR023299UniProt:K4D1T6
InterPro:P-type_ATPase_IVInterPro:P-type_ATPase_NPFAM:PF00122PFAM:PF00702PFAM:PF16209PFAM:PF16212
ScanProsite:PS00154PANTHER:PTHR24092PANTHER:PTHR24092:SF74InterPro:P_typ_ATPaseInterPro:P_typ_ATPase_cSUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665EnsemblPlantsGene:Solyc10g074940.1EnsemblPlants:Solyc10g074940.1.1TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01652TMHMM:TMhelixUniParc:UPI0002769A69SEG:seg::
Description
Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:K4D1T6]
Coordinates
chr10:+:58653789..58662146
Molecular Weight (calculated)
148672.0 Da
IEP (calculated)
6.333
GRAVY (calculated)
-0.123
Length
1324 amino acids
Sequence
(BLAST)
0001: MTSGKPLLSP SEPSSAPSSH HNNSSLGICS LGCLPQNASA SADLDELPET KLCDLKEEVD RGNQPLEDTS GVKNSRLHSS SLVNGNGTAE LQSFSSKYPP
0101: SRERKRLVSW GGTADHPLEQ TTFEISTDSS RVTSSGAVST RASSLKHLDE SRVLSRGQDK LNKSQRLLQK SMQLENDLLH GSNARLIHVN DPKKTNDQFE
0201: FTGNEIRTSK YTIINFLPKN LFIQFHRVAY LYFLAIAALN QLPPLAVFGR TVSLFPLLFV LSVTAIKDGY EDWRRHRSDR NENNREALVL QFGKFELKRW
0301: KNIRVGEVVK ILADETIPCD MVLLGTSDPS GIAYIQTMNL DGESNLKTRY ARQETTSLVS EVDTLSGVIR CEQPNRNIYE FTANMELNRH KFPLSQSNII
0401: LRGCQLKNTE WAMGVAVYAG QETKAMLNSA ASPSKRSRLE TYMNRETLWL SVFLFVMCLA VASGMCVWLK EHEKQLDTLP YYRKVYSEKG THPGKRYRYY
0501: GIPMETFFSF LSSVIVFQIM IPISLYITME LVRLGQSYFM IGDRHMYDDN SNSRFQCRSL NINEDLGQIR YIFSDKTGTL TENKMEFKRA SVWGKNYGRA
0601: FSAAGASLDP DFGESTAVPS NQGKLRLNAE IPTDSELMEL LHIELAGEER IAAHEFFMTL AACNTVIPIL THSSSSDEVH DTVGTIEYQG ESPDEQALVA
0701: AASAYGYTLC ERTSGHIVID VNGEKLRLDV LGLHEFDSVR KRMSVVIRFP SGAVKVLVKG ADTTMFSILR KDHKSHHDIQ NVTLSHLNEY SSEGLRTLVV
0801: GARDLTGEEL EEWQFMYEDA STSLTDRSAK LRQTASLIEC NLTLLGASAI EDKLQEGVPE AIESLRQAGM KVWVLTGDKQ ETAISIGMSC KLLTSDMQRI
0901: IINGTSENEC KRLLFDAKIK YGINSASCCN QISTCQSDAE NSYLEASASM QTSNLPEPHA GEEGVSDGPL ALIIDGNSLV YILEKDLETE LFDLATSCRA
1001: VICCRVAPLQ KAGIVDLIKS RTDDMTLAIG DGANDVSMIQ MADVGVGLCG QEGRQAVMAS DFAMGQFRFL KRLLLVHGHW NYQRVGYLVL YNFYRNAVFV
1101: FMLFWYILYA AFSTTSALTD WSSVFYSLIY TSIPTLVVGI LDKDLSHKTL LKYPKLYAAG YRQESYNMKL FWVTMLDTVW QSLVLFYVPL FIYDQSDIDI
1201: WSMGSLWTIA VVILVNMHLA MDVQRWLIFT HMAIWGSIVI TYGCLVVLDL IPVFPNYNTI FQLAKSPTYW LSILLIIVLA LLPRFIVKVI NQSFRPSDIQ
1301: IAREAEILKK NHSYIMSRPD HDTS
Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)
0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR
Arabidopsis Description
ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.