Factsheet for Solyc01g096930.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070787	Potato	plastid	96.67	96.75
KRH13093	Soybean	plasma membrane, plastid	73.72	73.16
KRH44746	Soybean	plasma membrane, plastid	72.95	72.4
CDX70183	Canola	plasma membrane	67.92	72.36
Bra009410.1-P	Field mustard	plasma membrane	67.83	72.27
VIT_13s0047g01210.t01	Wine grape	plasma membrane	75.26	71.88
AT5G04930.1	Thale cress	peroxisome	70.22	71.07
CDX80929	Canola	peroxisome	68.09	70.62
CDX98803	Canola	peroxisome	69.62	70.47
Bra005828.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.11	70.43
CDY11318	Canola	peroxisome	69.11	70.43
KRH62754	Soybean	plastid	71.76	69.91
KRH56288	Soybean	plastid	71.84	68.62
Zm00001d028987_P001	Maize	plasma membrane	53.07	68.05
TraesCS4A01G130300.1	Wheat	plasma membrane	62.8	65.6
TraesCS4B01G174300.1	Wheat	plasma membrane	62.71	65.57
KRH57832	Soybean	mitochondrion, plasma membrane	18.43	65.26
HORVU4Hr1G051450.4	Barley	plasma membrane	62.37	65.21
TraesCS4D01G176300.2	Wheat	plasma membrane	56.66	65.1
TraesCS3D01G193200.1	Wheat	plasma membrane	64.16	64.66
Os01t0277600-00	Rice	plasma membrane	64.59	64.43
HORVU3Hr1G039540.1	Barley	plasma membrane	63.82	64.37
TraesCS3B01G218800.1	Wheat	plasma membrane	63.74	64.29
Os03t0326100-01	Rice	peroxisome	26.28	64.17
EES02769	Sorghum	plasma membrane	64.51	64.07
TraesCS3A01G189700.1	Wheat	plasma membrane	60.84	64.06
Zm00001d040456_P002	Maize	plasma membrane	63.57	63.24
GSMUA_Achr3P09470_001	Banana	plasma membrane	49.49	62.17
GSMUA_AchrUn_...	Banana	plasma membrane	27.82	61.28
GSMUA_Achr10P...	Banana	plasma membrane	34.22	60.48
OQU92666	Sorghum	plasma membrane, plastid	63.31	60.42
GSMUA_Achr5P27740_001	Banana	plasma membrane	60.58	59.36
GSMUA_Achr5P07640_001	Banana	plasma membrane	54.27	59.0
GSMUA_Achr10P...	Banana	plasma membrane	22.7	57.33
GSMUA_Achr9P05000_001	Banana	plasma membrane	54.35	56.98
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	27.22	56.46
Zm00001d028988_P001	Maize	peroxisome	31.23	55.12
TraesCS4B01G174200.1	Wheat	plasma membrane	30.55	53.27
TraesCS4D01G176200.1	Wheat	cytosol, mitochondrion, plasma membrane	32.08	53.03
GSMUA_Achr3P09480_001	Banana	cytosol	11.01	52.23
GSMUA_Achr8P21510_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	62.2	51.7
Solyc10g074940.1.1	Tomato	cytosol, nucleus, peroxisome, plastid	58.02	51.36
Os03t0326200-01	Rice	plastid	32.34	48.4
Solyc04g006940.2.1	Tomato	nucleus	35.41	34.82
Solyc11g017170.1.1	Tomato	plasma membrane	23.98	34.56
Solyc02g086800.2.1	Tomato	plasma membrane	34.56	34.47
Solyc01g011100.2.1	Tomato	plasma membrane	28.75	33.53
Solyc05g006640.2.1	Tomato	plasma membrane, plastid	34.64	33.25
Solyc12g044920.1.1	Tomato	mitochondrion	33.45	32.48
Solyc01g011090.2.1	Tomato	plastid	6.83	32.13
Solyc03g121810.2.1	Tomato	mitochondrion	33.11	32.07
Solyc06g062780.2.1	Tomato	mitochondrion	32.59	31.49
Solyc02g069430.2.1	Tomato	plasma membrane	13.14	31.3
Solyc02g069420.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	19.97	29.14
Solyc12g062510.1.1	Tomato	cytosol	3.33	27.27
Solyc11g017190.1.1	Tomato	golgi, peroxisome, plasma membrane	6.83	23.05

Protein Annotations

MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4B081	InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N
PFAM:PF00122	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF74	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc01g096930.2	EnsemblPlants:Solyc01g096930.2.1	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652
TMHMM:TMhelix	UniParc:UPI0002767E2B	SEG:seg	:	:	:

Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:K4B081]

Coordinates

chr1:+:87933145..87938972

Molecular Weight (calculated)

131033.0 Da

IEP (calculated)

6.696

GRAVY (calculated)

0.027

Length

1172 amino acids

Sequence
(BLAST)

0001: MENNSPVTDS IMMKSSSIRS MSSNRSRASG GGSVREVNLG EFGSKPVRRG SRGADSEGYG TSQKEISDED SRIVYLSDPE RTNEKFEFSG NSIRTAKYSI
0101: VTFLPRNLFE QFHRVAYIYF LVIAILNQLP MLAVFGRGAS ILPLAFVLLV TAVKDAYEDY RRHRSDRIEN NRLALVLLDG QFQEKKWKEI KVGEIIKISS
0201: SGTIPCDMVL LSTSDPTGVA YIQTINLDGE SNLKTRYAKQ ETQMKMPEKD SISGMIKCEK PNRNIYGFHA NMEIDGKRVS LGPSNIILRG CELKNTSWAI
0301: GVAVYAGRET KAMLNNSGAP SKRSRLETRM NREIIILSFF LIALCTLVSV CAGVWLRHHK DELNTIPFYR KLDFSEDEVE DYNYYGWGLE IVFTFLMSVI
0401: VYQIMIPISL YISMELVRVG QAYFMIQDNR MYDETSNARF QCRALNINED LGQIKYVFSD KTGTLTENKM EFQCASIWGV DYGSGKSDSQ EEVAGFSAQD
0501: GQALRPKMKV KVDPVLLNLS KSGKHSDEGK HVHDFFLALA ACNTIVPLAV ETSDPAVKLI DYQGESPDEQ ALVYAAAAYG FMLIERTSGH IVIDVQGERK
0601: RFNVLGLHEF DSDRKRMSVI LGCPDNTVKV FVKGADTTMF GIIDKSLSLN VVRATELHLH SYSSMGLRTL VVGMREMSAS EYEEWQSSYE AANTSVIGRA
0701: ALLRKVAGNV EKNLTILGAS GIEDKLQEGV PEAIESLRVA GIKVWVLTGD KQETAISIGY SSKLLTNSMT QIVINNKSKE SCKRSLEAAL TRCKSLTPQN
0801: AEENIVAGAS AIALIIDGTS LVYVLDGELE ELLFQLASYC SVVLCCRVAP LQKAGIVALI KNRADDMTLA IGDGANDVSM IQMADVGIGI SGQEGRQAVM
0901: ASDFAMGQFR FLVPLLLVHG HWNYQRMGYM ILYNFYRNAI LVFVLFWYAL FTAFTLTTAL TDWSSMLYSI IYTAVPTIVV GILDKDLSRV TLMKYPQLYG
1001: AGQRQESYNK KLFWVTMIDT LWQSIVAFFI PVLAYWESEI DISSIGDLWT LAVVILVNVH LAMDVIRWSW ITHAAIWGSI VATFICVIVI DSLTFLPGYW
1101: AIFHAAAEAK FWFCLLSITI AALAPRFVVK AFIQHARPRD IQIAREGEKF RNLRDSQTAE IEMNPIVDPP RR

Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)

0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR

Arabidopsis Description

ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.