Factsheet for Solyc04g006940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019314	Potato	mitochondrion	97.82	97.82
Solyc12g062510.1.1	Tomato	cytosol	9.23	76.92
VIT_01s0011g02480.t01	Wine grape	mitochondrion	74.16	74.54
CDY07368	Canola	mitochondrion	74.33	73.89
Bra004020.1-P	Field mustard	mitochondrion	74.16	73.79
CDY72124	Canola	peroxisome, plasma membrane	32.13	73.51
KRH07629	Soybean	mitochondrion	72.23	73.4
CDX95995	Canola	mitochondrion, plasma membrane	73.83	73.21
CDY38611	Canola	mitochondrion, plasma membrane	73.57	73.14
Bra004332.1-P	Field mustard	mitochondrion, plasma membrane	73.74	73.13
KRH71099	Soybean	mitochondrion, plasma membrane	73.49	73.12
CDY04247	Canola	mitochondrion	74.25	73.02
KRH75561	Soybean	mitochondrion	73.32	72.95
KRH45394	Soybean	mitochondrion	73.24	72.87
KRH54589	Soybean	peroxisome, plasma membrane	60.99	72.85
AT1G68710.3	Thale cress	mitochondrion	74.08	72.02
Bra026515.1-P	Field mustard	mitochondrion	72.4	71.8
CDY46505	Canola	mitochondrion	72.4	71.8
GSMUA_Achr10P...	Banana	plasma membrane	66.61	71.47
CDX99767	Canola	mitochondrion	72.06	71.46
KRH63294	Soybean	mitochondrion	69.71	71.27
AT1G13210.1	Thale cress	mitochondrion	71.48	70.82
AT3G25610.1	Thale cress	mitochondrion	71.39	70.8
CDY16073	Canola	mitochondrion, plasma membrane	71.56	70.73
Bra026919.1-P	Field mustard	mitochondrion	71.31	70.48
CDY26633	Canola	mitochondrion	71.22	70.4
Bra025150.1-P	Field mustard	mitochondrion	70.89	70.24
CDY48077	Canola	mitochondrion	70.72	70.07
AT1G26130.3	Thale cress	mitochondrion	69.63	70.04
Bra019818.1-P	Field mustard	mitochondrion	70.97	70.03
CDY19388	Canola	mitochondrion	70.89	70.01
CDY51126	Canola	mitochondrion	67.03	69.9
CDY20531	Canola	mitochondrion	66.86	69.73
Bra012469.1-P	Field mustard	mitochondrion	66.78	69.64
CDX98001	Canola	mitochondrion	70.97	69.57
Bra039027.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	15.94	67.14
TraesCS7B01G130000.1	Wheat	mitochondrion	67.28	66.67
TraesCS7A01G231600.2	Wheat	mitochondrion	67.37	66.64
TraesCS7D01G231800.2	Wheat	mitochondrion	67.28	66.56
EER89739	Sorghum	mitochondrion	66.53	66.03
TraesCS1A01G002500.1	Wheat	plasma membrane	68.04	65.99
HORVU7Hr1G047470.1	Barley	mitochondrion	66.69	65.98
Os05t0100600-02	Rice	peroxisome, plasma membrane	27.6	65.67
Solyc02g086800.2.1	Tomato	plasma membrane	64.43	65.36
Zm00001d045956_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	65.94	65.34
GSMUA_Achr1P20640_001	Banana	mitochondrion	64.77	65.2
EES17516	Sorghum	plasma membrane, plastid	65.44	65.0
HORVU1Hr1G000140.5	Barley	nucleus, plasma membrane	67.53	64.66
TraesCS1D01G004700.2	Wheat	plasma membrane	68.12	64.14
HORVU0Hr1G026480.3	Barley	mitochondrion, nucleus	44.46	63.93
TraesCS1B01G001800.2	Wheat	plasma membrane	67.7	63.69
Zm00001d037465_P003	Maize	mitochondrion, plasma membrane	65.6	63.32
Zm00001d035775_P001	Maize	plasma membrane	66.28	62.01
Os06t0488600-01	Rice	plasma membrane	16.53	61.76
TraesCS2A01G313800.1	Wheat	cytosol	9.56	61.62
Solyc06g062780.2.1	Tomato	mitochondrion	58.05	57.05
Solyc12g044920.1.1	Tomato	mitochondrion	57.05	56.34
GSMUA_Achr6P09190_001	Banana	mitochondrion	63.76	55.88
Solyc03g121810.2.1	Tomato	mitochondrion	56.71	55.87
Solyc02g069430.2.1	Tomato	plasma membrane	21.64	52.44
Solyc02g069420.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	33.05	49.07
Solyc01g011100.2.1	Tomato	plasma membrane	37.84	44.88
Solyc05g006640.2.1	Tomato	plasma membrane, plastid	45.89	44.8
Solyc01g011090.2.1	Tomato	plastid	9.06	43.37
Solyc01g096930.2.1	Tomato	plastid	34.82	35.41
Solyc11g017170.1.1	Tomato	plasma membrane	23.15	33.95
Solyc10g074940.1.1	Tomato	cytosol, nucleus, peroxisome, plastid	34.9	31.42
Solyc11g017190.1.1	Tomato	golgi, peroxisome, plasma membrane	6.38	21.9

Protein Annotations

Gene3D:2.70.150.10	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000139	GO:GO:0000166	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	GO:GO:0048194	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4BNK1	InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N
PFAM:PF00122	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF41	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc04g006940.2	EnsemblPlants:Solyc04g006940.2.1	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652
TMHMM:TMhelix	UniParc:UPI00027665F0	SEG:seg	:	:	:

Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:K4BNK1]

Coordinates

chr4:-:625569..631037

Molecular Weight (calculated)

134915.0 Da

IEP (calculated)

6.585

GRAVY (calculated)

-0.005

Length

1192 amino acids

Sequence
(BLAST)

0001: MKTGRRRKLH FSKIYTFKCG RDSFLGDVDH SQIGGPGYSR VVYCNEPSSF ESVIRDYVGN YVSTTKYSSA TFLPKSLFEQ FRRVANFYFL VIAILSFTPL
0101: TPYSPATAVI PLVIVIGVTM LKEGIEDWQR KQQDIEMNNR KVKVHQENGV FNQTEWKNLR VGDIVKVEKD EFFPADLLLL SSSYEDAVCY VETMNLDGET
0201: NLKLKQALEV TSSLHEDSHF KDFKAFVKCE DPNANLYAFV GTMEYGEKQN HLSPQQLLLR DSKLRNTDYI YGAVIFTGHD TKVMQNATDP PSKRSNVERR
0301: MDKIIYFLFV LLVTMSFVGS VCFGFLTKED LYDGHKRWYL RPDESNIYYD PNRAFAASVY HFLTAVMLYS YLIPISLYVS IEIVKVLQSM FINQDIHMYH
0401: EETDRPAHAR TSNLNEELGQ VDTILSDKTG TLTCNSMEFV KCSVAGTAYG RGITDVEKAM AKRNGSPLIE DSAVSPKKSS IKGFNFQDER IMNGSWVHEP
0501: HLDVIQKFFR LLAVCHTVIP EVDEETSKIS YEAESPDEAA FVVAAKEIGF ELVKRTQTSV SVHELDPVSG KKVERLYTVL NVLEFNSARK RMSVIVKDEE
0601: GKILLLCKGA DSVMFERLAK SGREFEEITR EHVNEYADAG LRTLILAYRE ITKDEYQVFN EQFLQAKNSV SADRDALIDE ATKKIEKELI LLGATAVEDK
0701: LQQGVPECID KLAQAGIKIW VLTGDKMETA INIGYACSLL RQGMKQIIIN LETPDIIATE KGGDKDAIAK TSKESVVRQI IEGKALLTDS KAKAFALIID
0801: GKSLTYALAD DTKRLLLDLA IGCASVICCR SSPKQKALVT RLVKFGTGKT TLAIGDGAND VGMLQEADIG IGISGVEGMQ AVMSSDVAIA QFRFLERLLL
0901: VHGHWCYRRI SSMICYFFYK NVAFGFTLFL YETYASFSAQ LAYNDWFLSL YNVFFTSLPV IALGVFDQDV SARYCLKFPI LYQEGIQNVL FSWRRIIGWM
1001: LNGVCSAAII FFICITTLDP QAFDKNGKTG DYSIVGATMY TCVVWVVNCQ MALAVSYFTL IQHIFIWGGI ALWYIFLVIY GAIPTTLSTN AYQVFVEALV
1101: PSALYWLVTL LVVVSALAPY FTYEAIQFRF FPMYHGMIQW IRYEGNSNDP EFCNDVRQRS IRLTTVGFTA RLIARSNSSL KRHEWYSRMI FD

Best Arabidopsis Sequence Match ( AT1G68710.1 )
(BLAST)

0001: MVGGGTKRRR RRLQLSKLYT LTCAQACFKQ DHSQIGGPGF SRVVYCNEPD SPEADSRNYS DNYVRTTKYT LATFLPKSLF EQFRRVANFY FLVTGVLAFT
0101: PLAPYTASSA IVPLLFVIGA TMVKEGVEDW RRQKQDNEVN NRKVKVHRGD GSFDAKEWKT LSIGDIVKVE KNEFFPADLV LLSSSYEDAI CYVETMNLDG
0201: ETNLKVKQGL EVTSSLRDEF NFKGFEAFVK CEDPNANLYS FVGTMELKGA KYPLSPQQLL LRDSKLRNTD FIFGAVIFTG HDTKVIQNST DPPSKRSMIE
0301: KKMDKIIYLM FFMVITMAFI GSVIFGVTTR DDLKDGVMKR WYLRPDSSSI FFDPKRAPVA AIYHFLTAVM LYSYFIPISL YVSIEIVKVL QSIFINQDIH
0401: MYYEEADKPA RARTSNLNEE LGQVDTILSD KTGTLTCNSM EFIKCSVAGT AYGRGVTEVE MAMGRRKGGP LVFQSDENDI DMEYSKEAIT EESTVKGFNF
0501: RDERIMNGNW VTETHADVIQ KFFRLLAVCH TVIPEVDEDT EKISYEAESP DEAAFVIAAR ELGFEFFNRT QTTISVRELD LVSGKRVERL YKVLNVLEFN
0601: STRKRMSVIV QEEDGKLLLL CKGADNVMFE RLSKNGREFE EETRDHVNEY ADAGLRTLIL AYRELDEKEY KVFNERISEA KSSVSADRES LIEEVTEKIE
0701: KDLILLGATA VEDKLQNGVP DCIDKLAQAG IKIWVLTGDK METAINIGFA CSLLRQDMKQ IIINLETPEI QSLEKTGEKD VIAKASKENV LSQIINGKTQ
0801: LKYSGGNAFA LIIDGKSLAY ALDDDIKHIF LELAVSCASV ICCRSSPKQK ALVTRLVKSG NGKTTLAIGD GANDVGMLQE ADIGVGISGV EGMQAVMSSD
0901: IAIAQFRYLE RLLLVHGHWC YRRISTMICY FFYKNITFGF TLFLYETYTT FSSTPAYNDW FLSLYNVFFS SLPVIALGVF DQDVSARYCL KFPLLYQEGV
1001: QNVLFSWRRI LGWMFNGFYS AVIIFFLCKS SLQSQAFNHD GKTPGREILG GTMYTCIVWV VNLQMALAIS YFTLIQHIVI WSSIVVWYFF ITVYGELPSR
1101: ISTGAYKVFV EALAPSLSYW LITLFVVVAT LMPYFIYSAL QMSFFPMYHG MIQWLRYEGQ CNDPEYCDIV RQRSIRPTTV GFTARLEAKK RSVRISEPAS

Arabidopsis Description

ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Source:TAIR;Acc:AT1G68710]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.