Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 5
  • peroxisome 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035775_P001 Maize plasma membrane 90.92 85.64
Os05t0100600-02 Rice peroxisome, plasma membrane 33.42 80.04
TraesCS1A01G002500.1 Wheat plasma membrane 74.5 72.74
HORVU1Hr1G000140.5 Barley nucleus, plasma membrane 74.92 72.21
TraesCS1D01G004700.2 Wheat plasma membrane 74.75 70.85
TraesCS1B01G001800.2 Wheat plasma membrane 74.58 70.64
GSMUA_Achr10P... Banana plasma membrane 64.25 69.4
CDY72124 Canola peroxisome, plasma membrane 29.75 68.52
HORVU0Hr1G026480.3 Barley mitochondrion, nucleus 47.25 68.4
TraesCS2A01G313800.1 Wheat cytosol 10.5 68.11
KRH54589 Soybean peroxisome, plasma membrane 55.42 66.63
Solyc04g006940.2.1 Tomato nucleus 65.0 65.44
PGSC0003DMT400019314 Potato mitochondrion 64.83 65.27
VIT_01s0011g02480.t01 Wine grape mitochondrion 63.92 64.67
PGSC0003DMT400064690 Potato mitochondrion 64.17 64.44
CDY07368 Canola mitochondrion 63.67 63.72
Bra004020.1-P Field mustard mitochondrion 63.58 63.69
KRH62962 Soybean mitochondrion, plasma membrane 63.0 63.58
EER89739 Sorghum mitochondrion 63.5 63.45
KRH54783 Soybean plasma membrane 62.58 63.11
KRH75561 Soybean mitochondrion 63.0 63.11
KRH71099 Soybean mitochondrion, plasma membrane 62.92 63.02
CDY38611 Canola mitochondrion, plasma membrane 62.92 62.97
CDX95995 Canola mitochondrion, plasma membrane 63.0 62.9
Bra004332.1-P Field mustard mitochondrion, plasma membrane 62.92 62.81
AT3G25610.1 Thale cress mitochondrion 62.92 62.81
KRH07629 Soybean mitochondrion 61.33 62.75
CDY46505 Canola mitochondrion 62.83 62.73
Bra026515.1-P Field mustard mitochondrion 62.83 62.73
CDX99767 Canola mitochondrion 62.67 62.56
CDY04247 Canola mitochondrion 63.17 62.54
VIT_17s0000g04450.t01 Wine grape mitochondrion, plasma membrane 62.75 62.49
CDY16073 Canola mitochondrion, plasma membrane 62.75 62.44
AT1G13210.1 Thale cress mitochondrion 62.58 62.43
CDY26633 Canola mitochondrion 62.67 62.35
Bra025150.1-P Field mustard mitochondrion 62.5 62.34
KRH56719 Soybean mitochondrion 62.58 62.32
AT1G68710.3 Thale cress mitochondrion 63.67 62.32
Bra026919.1-P Field mustard mitochondrion 62.58 62.27
KRH45394 Soybean mitochondrion 62.08 62.19
CDY48077 Canola mitochondrion 62.33 62.18
KRH63294 Soybean mitochondrion 60.33 62.09
KRH03844 Soybean mitochondrion 62.83 61.96
Bra019818.1-P Field mustard mitochondrion 62.08 61.67
CDY19388 Canola mitochondrion 62.0 61.64
CDX98001 Canola mitochondrion 62.25 61.43
AT1G26130.3 Thale cress mitochondrion 60.33 61.1
CDY51126 Canola mitochondrion 58.0 60.89
CDY20531 Canola mitochondrion 58.0 60.89
Bra012469.1-P Field mustard mitochondrion 58.0 60.89
Bra039027.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 14.0 59.36
GSMUA_Achr1P20640_001 Banana mitochondrion 58.08 58.87
EES13762 Sorghum plasma membrane, plastid 53.92 55.73
PGSC0003DMT400053816 Potato cytosol, plasma membrane, plastid 9.33 55.45
OQU76591 Sorghum mitochondrion, plasma membrane 54.08 53.15
GSMUA_Achr6P09190_001 Banana mitochondrion 59.5 52.5
KXG38553 Sorghum plasma membrane 43.67 42.16
EES02769 Sorghum plasma membrane 32.75 33.31
KXG36585 Sorghum plasma membrane 29.42 32.0
OQU92666 Sorghum plasma membrane, plastid 32.67 31.92
OQU81316 Sorghum plasma membrane 28.42 31.57
EER94908 Sorghum cytosol, plastid 33.58 30.74
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000MapMan:5.8.2.1.1.1EntrezGene:8066577InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfUniProt:C5YXW9EnsemblPlants:EES17516ProteinID:EES17516
ProteinID:EES17516.2GO:GO:0000139GO:GO:0000166GO:GO:0000287GO:GO:0003674GO:GO:0003824
GO:GO:0004012GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0009987GO:GO:0015914GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016787GO:GO:0045332GO:GO:0048194InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214
InterPro:IPR023299InterPro:P-type_ATPase_IVInterPro:P-type_ATPase_NPFAM:PF13246PFAM:PF16209PFAM:PF16212
PRINTS:PR00119ScanProsite:PS00154PANTHER:PTHR24092PANTHER:PTHR24092:SF65InterPro:P_typ_ATPaseInterPro:P_typ_ATPase_c
EnsemblPlantsGene:SORBI_3009G000200SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665unigene:Sbi.10765
TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelixUniParc:UPI000B8BA387RefSeq:XP_002439086.1SEG:seg
Description
hypothetical protein
Coordinates
chr9:+:45063..50274
Molecular Weight (calculated)
133233.0 Da
IEP (calculated)
5.865
GRAVY (calculated)
-0.025
Length
1200 amino acids
Sequence
(BLAST)
0001: MASASSTNSI STTKYNLFTF LPKSLFEQFR RVANIYFLLS AGIAYSPLAA YSSSSAIAPL VIVLVATMIK EAIEDWRRNQ QDTEVNNRTT QVFFQQAQAQ
0101: AGDGDGDAAR GGFRDAKWKD IRVGDIVKVH KDEFFPADLV LLSSSYEDAI CYVETMNLDG ETNLKLKQSL EVTSASLPDD DSFRGFAGAV VRCEDPNAHL
0201: YTFVGNIEID GQQHPLSPQQ LLLRDSKLRN TDFVYGVVVF TGHDTKVMQN SMKVPSKRSN VEKKMDRVMY LLLFSLIVIS VVSSVVFGVA TGDDLQDGRM
0301: KRWYLRPDDT EIYYDPNNAA VAAVLHFFTA IMLYGYFIPI SLYISIEIVK LLQALFINND IHMYHHETDT PAHARTSNLN EELGQVDTIL TDKTGTLTCN
0401: SMEFIKCSIA GTAYGRGITE VERAMARRKG SPVIADHDNN NMDKGNNNGI QQQSSSDSEG NSKPAVKGFN FVDERVMGGN WVNQPGSGVI EMFFRLLAVC
0501: HTCIPEVDQE SGKISYEAES PDEAAFVVAA RELGFTFYKR TQTGVSLREL DPSSGKQVDR SYKILNVLEF NSARKRMSVV VKNEEGKIFL FTKGADSVMF
0601: ERLSGSETAY REVTQRHINE YADAGLRTLV LAYRELKEDE YAYFDGKFTA AKSSVSTDRD EKIDEAADLV ERDLILLGAT AVEDKLQKGV PECIDKLAQA
0701: GIKIWVLTGD KMETAINIGY ACSLLRQGMK QITITLETAD VIALEKGSDK AALTKASKDS VARQINEGKK LVNASSGESF ALIIDGKSLT YALEDDTKDM
0801: FLDLAVGCGS VICCRSSPKQ KALVTRLVKT GTGKVTLAIG DGANDVGMIQ EADIGVGISG AEGMQAVMAS DVSIAQFRFL ERLLLVHGHW CYSRISSMIC
0901: YFFYKNITFG VTLFLYDAYT SFSGQPFYND WAMACFNVFF TSLPVIAMGV FDQDVSARFC LKFPMLYQEG PQNLLFQWRR IIGWMLNGVA SAVIIFFLST
1001: ASLQHQAFRI GGQVTDMATL GATAYTCIVW AVNLQMYITV SYFTLVQHVC IWLSIALWYV FLPVYGAITP SFSTTYYMVF VEALAGAPSY WVVTLLVSAA
1101: ALVPFFTYAV VKSWFFPDYH NRIQWLRHRE KAKAHPDPET SADVELSQVL RQFSVRSTGV GVSARRDATA VLRRLNSTTQ HADYYSQSPA PGVVVVTTDR
Best Arabidopsis Sequence Match ( AT1G68710.1 )
(BLAST)
0001: MVGGGTKRRR RRLQLSKLYT LTCAQACFKQ DHSQIGGPGF SRVVYCNEPD SPEADSRNYS DNYVRTTKYT LATFLPKSLF EQFRRVANFY FLVTGVLAFT
0101: PLAPYTASSA IVPLLFVIGA TMVKEGVEDW RRQKQDNEVN NRKVKVHRGD GSFDAKEWKT LSIGDIVKVE KNEFFPADLV LLSSSYEDAI CYVETMNLDG
0201: ETNLKVKQGL EVTSSLRDEF NFKGFEAFVK CEDPNANLYS FVGTMELKGA KYPLSPQQLL LRDSKLRNTD FIFGAVIFTG HDTKVIQNST DPPSKRSMIE
0301: KKMDKIIYLM FFMVITMAFI GSVIFGVTTR DDLKDGVMKR WYLRPDSSSI FFDPKRAPVA AIYHFLTAVM LYSYFIPISL YVSIEIVKVL QSIFINQDIH
0401: MYYEEADKPA RARTSNLNEE LGQVDTILSD KTGTLTCNSM EFIKCSVAGT AYGRGVTEVE MAMGRRKGGP LVFQSDENDI DMEYSKEAIT EESTVKGFNF
0501: RDERIMNGNW VTETHADVIQ KFFRLLAVCH TVIPEVDEDT EKISYEAESP DEAAFVIAAR ELGFEFFNRT QTTISVRELD LVSGKRVERL YKVLNVLEFN
0601: STRKRMSVIV QEEDGKLLLL CKGADNVMFE RLSKNGREFE EETRDHVNEY ADAGLRTLIL AYRELDEKEY KVFNERISEA KSSVSADRES LIEEVTEKIE
0701: KDLILLGATA VEDKLQNGVP DCIDKLAQAG IKIWVLTGDK METAINIGFA CSLLRQDMKQ IIINLETPEI QSLEKTGEKD VIAKASKENV LSQIINGKTQ
0801: LKYSGGNAFA LIIDGKSLAY ALDDDIKHIF LELAVSCASV ICCRSSPKQK ALVTRLVKSG NGKTTLAIGD GANDVGMLQE ADIGVGISGV EGMQAVMSSD
0901: IAIAQFRYLE RLLLVHGHWC YRRISTMICY FFYKNITFGF TLFLYETYTT FSSTPAYNDW FLSLYNVFFS SLPVIALGVF DQDVSARYCL KFPLLYQEGV
1001: QNVLFSWRRI LGWMFNGFYS AVIIFFLCKS SLQSQAFNHD GKTPGREILG GTMYTCIVWV VNLQMALAIS YFTLIQHIVI WSSIVVWYFF ITVYGELPSR
1101: ISTGAYKVFV EALAPSLSYW LITLFVVVAT LMPYFIYSAL QMSFFPMYHG MIQWLRYEGQ CNDPEYCDIV RQRSIRPTTV GFTARLEAKK RSVRISEPAS
Arabidopsis Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Source:TAIR;Acc:AT1G68710]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.