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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0488600-01 Rice plasma membrane 38.39 62.7
CDY48077 Canola mitochondrion 98.46 42.64
CDY46505 Canola mitochondrion 95.39 41.35
AT3G25610.1 Thale cress mitochondrion 94.63 41.02
CDX99767 Canola mitochondrion 94.43 40.93
CDY16073 Canola mitochondrion, plasma membrane 89.44 38.64
CDY26633 Canola mitochondrion 89.06 38.47
CDY19388 Canola mitochondrion 87.33 37.7
CDX98001 Canola mitochondrion 87.91 37.66
KRH54589 Soybean peroxisome, plasma membrane 68.91 35.97
GSMUA_Achr10P... Banana plasma membrane 71.78 33.66
CDY65725 Canola plasma membrane 31.29 33.47
CDY38611 Canola mitochondrion, plasma membrane 76.97 33.44
CDX95995 Canola mitochondrion, plasma membrane 77.16 33.44
CDY07368 Canola mitochondrion 76.39 33.19
CDY04247 Canola mitochondrion 76.78 33.0
KRH71099 Soybean mitochondrion, plasma membrane 75.43 32.8
KRH75561 Soybean mitochondrion 75.43 32.8
PGSC0003DMT400019314 Potato mitochondrion 73.51 32.13
Solyc04g006940.2.1 Tomato nucleus 73.51 32.13
VIT_01s0011g02480.t01 Wine grape mitochondrion 72.74 31.96
PGSC0003DMT400064690 Potato mitochondrion 72.94 31.8
KRH45394 Soybean mitochondrion 72.74 31.64
KRH07629 Soybean mitochondrion 70.25 31.2
CDY51126 Canola mitochondrion 67.37 30.71
CDY20531 Canola mitochondrion 67.18 30.62
KRH63294 Soybean mitochondrion 68.14 30.45
TraesCS7B01G130000.1 Wheat mitochondrion 69.48 30.09
TraesCS7A01G231600.2 Wheat mitochondrion 69.48 30.04
TraesCS7D01G231800.2 Wheat mitochondrion 69.1 29.88
HORVU7Hr1G047470.1 Barley mitochondrion 69.1 29.88
EES17516 Sorghum plasma membrane, plastid 68.52 29.75
EER89739 Sorghum mitochondrion 67.56 29.31
Zm00001d045956_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 66.6 28.84
Zm00001d037465_P003 Maize mitochondrion, plasma membrane 67.18 28.34
TraesCS2A01G313800.1 Wheat cytosol 9.98 28.11
TraesCS1A01G002500.1 Wheat plasma membrane 65.83 27.91
Zm00001d035775_P001 Maize plasma membrane 67.95 27.79
HORVU1Hr1G000140.5 Barley nucleus, plasma membrane 66.03 27.63
GSMUA_Achr1P20640_001 Banana mitochondrion 62.0 27.28
CDY44442 Canola plasma membrane 62.19 27.11
TraesCS1D01G004700.2 Wheat plasma membrane 65.64 27.01
CDX86464 Canola peroxisome 61.61 26.86
TraesCS1B01G001800.2 Wheat plasma membrane 65.26 26.84
GSMUA_Achr6P09190_001 Banana mitochondrion 67.56 25.88
CDX81828 Canola mitochondrion, plasma membrane 57.58 24.63
CDY21747 Canola mitochondrion, plasma membrane 57.58 24.63
CDX72937 Canola mitochondrion, plasma membrane 57.39 24.35
CDX96429 Canola mitochondrion 56.81 24.14
CDY55204 Canola mitochondrion 57.2 24.13
CDY26129 Canola mitochondrion 55.09 23.37
CDY08221 Canola mitochondrion 55.09 23.37
CDY02467 Canola mitochondrion 55.66 23.35
CDY10603 Canola mitochondrion 55.28 23.19
CDY49858 Canola mitochondrion, plasma membrane 49.52 21.9
CDY53865 Canola mitochondrion, plasma membrane 49.52 21.74
CDY34893 Canola plastid 42.03 18.01
CDY24494 Canola plastid 41.07 17.61
CDY07798 Canola plastid 42.03 17.6
CDX70183 Canola plasma membrane 34.93 16.55
CDY27294 Canola plastid 34.93 15.77
CDX80929 Canola peroxisome 34.17 15.75
CDX98803 Canola peroxisome 34.74 15.63
CDY11318 Canola peroxisome 34.17 15.48
CDX96956 Canola plasma membrane 29.17 14.67
CDX94764 Canola plasma membrane 29.56 13.97
CDY22301 Canola plasma membrane 28.98 13.7
CDY33607 Canola plastid 41.07 11.92
CDY70011 Canola cytosol 2.3 9.52
HORVU0Hr1G026480.3 Barley mitochondrion, nucleus 14.78 9.29
Os05t0100600-02 Rice peroxisome, plasma membrane 5.18 5.39
Protein Annotations
MapMan:24.1.2.4.1.1Gene3D:3.40.50.1000MapMan:5.8.2.1.1.1GO:A0A078JZJ5UniProt:A0A078JZJ5InterPro:ATPase_P-typ_TM_dom_sf
EnsemblPlants:CDY72124ProteinID:CDY72124ProteinID:CDY72124.1GO:GO:0000166GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0004012GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0015914GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0045332EnsemblPlantsGene:GSBRNA2T00025056001InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:P-type_ATPase_IVPFAM:PF16212PANTHER:PTHR24092PANTHER:PTHR24092:SF41InterPro:P_typ_ATPase
InterPro:P_typ_ATPase_cSUPFAM:SSF56784SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelix
UniParc:UPI0004EE7CEFSEG:seg::::
Description
BnaCnng76100DPhospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078JZJ5]
Coordinates
chrLK049080:-:162..2289
Molecular Weight (calculated)
58915.7 Da
IEP (calculated)
5.912
GRAVY (calculated)
0.264
Length
521 amino acids
Sequence
(BLAST)
001: EALIDEITDK MERDLILLGA TAVEDKLQNG VPECIDKLAQ AGIKIWVLTG DKMETAINIG FASSLLRQEM KQIIINLETP HIKSLEKSGI KDEIELASRE
101: SVVKQIEEGR ALLAASGASS EAFALIIDGK SLTYALEDEI KKTFLDLATG CASVICCRSS PKQKALVTRL VKSGTGKTTL AIGDGANDVG MLQEADIGVG
201: ISGVEGMQAV MSSDIAIAQF RYLERLLLVH GHWCYSRISS MICYFFYKNI TFGVTIFLYE AYTSFSAQPA YNDWFLSLFN VFFSSLPVIA LGVFDQDVSA
301: RFCYKFPLLY QEGVQNILFS WKRIIGWMFN GFISALAIFF LCKESLKHQL FDPNGKTAGW EVLGGTMYTC IVWVVNLQMA LSISYFTWIQ HIVIWGSIAL
401: WYIFLMIYGA MSPSFSTDAY MVFLEALAPA PSYWLTTLFV MIFALIPYFI YKSVQMRFFP VYHQMIQWIR YEGHSNDPEF VEMVRQRSIR PTTVGYTARR
501: AASVRREDRF YDQFHNDLVA F
Best Arabidopsis Sequence Match ( AT1G13210.1 )
(BLAST)
0001: MTKCRRRRLH LSNIYAFKGR KSNFQEDHSH IGGPGFSRVV YCNEPNSPAA ERRNYVGNYV RSTKYTLASF IPKSLFEQFR RVANFYFLVT GVLSLTALSP
0101: YSPISALLPL TFVIAASMVK EAIEDWGRKK QDIEMNNRKV KVHDGNGIFR REGWRDLKVG NIVRVEKDEF FPADLLLLSS SYEDSICYVE TMNLDGETNL
0201: KVKQGLEATS SALHEDSDFK ELKAVVKCED PNADLYTFVG TLHFEEQRLP LSITQLLLRD SKLRNTEYIY GVVVFTGHDT KVIQNSTDPP SKRSRIERKM
0301: DKIIYLMFGV VFLMSFIGSI VFGIETREDR VRNGGRTERW YLRPDNADIF FDPDRAPMAA VYHFFTAVML YSYFIPISLY VSIEIVKVLQ SLFINNDILM
0401: YYEENDKPAH ARTSNLNEEL GMVDTILSDK TGTLTCNSME FIKCSIAGTA YGRGITEVER SMAMRSNGSS LVGDDLDVVV DQSGPKIKGF NFLDERVMKG
0501: NWVKQRDAAV LQKFFRLLAV CHTAIPETDE ATGSVSYEAE SPDEAAFVVA AREFGFEFFS RTQNGISFRE LDLASGKTVE RVYRLLNVLE FNSARKRMSV
0601: IVRDEDGRLL LLSKGADNVM FERLAKNGRK FEEKTREHVN EYADAGLRTL ILAYREVDEN EYIEFSKNFN EAKNSVTADR ESLIDEITEQ MERDLILLGA
0701: TAVEDKLQNG VPDCIDKLAQ AGIKIWVLTG DKMETAINIG FACSLLRQEM KQIIINLETP HIKALEKAGE KDAIEHASRE SVVNQMEEGK ALLTASSSAS
0801: SHEAFALIID GKSLTYALED DFKKKFLDLA TGCASVICCR SSPKQKALVT RLVKSGTGKT TLAIGDGAND VGMLQEADIG VGISGVEGMQ AVMSSDIAIA
0901: QFRYLERLLL VHGHWCYSRI SSMICYFFYK NITFGVTVFL YEAYTSFSAQ PAYNDWFLSL FNVFFSSLPV IALGVFDQDV SARYCYKFPL LYQEGVQNLL
1001: FSWKRIIGWM FNGVFTALAI FFLCKESLKH QLYNPNGKTA GREILGGTMY TCVVWVVNLQ MALAISYFTW LQHIVIWGSV AFWYIFLMIY GAITPSFSTD
1101: AYKVFIEALA PAPSYWLTTL FVMFFALIPF FVFKSVQMRF FPGYHQMIQW IRYEGHSNDP EFVEMVRQRS IRPTTVGFTA RRAASVRRSG RFHDQLNKNF
1201: IAF
Arabidopsis Description
ALA11Probable phospholipid-transporting ATPase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.