Factsheet for VIT_08s0058g01400.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09548	Soybean	plasma membrane	75.95	76.47
PGSC0003DMT400080209	Potato	plasma membrane	45.22	72.36
KRH40719	Soybean	cytosol, peroxisome, plasma membrane	77.48	70.55
KRH00430	Soybean	cytosol	77.39	70.52
Os03t0334700-01	Rice	plasma membrane	48.77	67.69
Solyc10g074940.1.1	Tomato	cytosol, nucleus, peroxisome, plastid	74.6	66.54
EER94908	Sorghum	cytosol, plastid	71.38	64.3
TraesCS4A01G134800.2	Wheat	cytosol, plastid	70.87	63.75
HORVU4Hr1G050400.3	Barley	cytosol, plastid	70.7	63.69
TraesCS4D01G172400.1	Wheat	cytosol, plastid	70.79	63.67
TraesCS4B01G170400.1	Wheat	cytosol, plastid	70.79	63.67
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane, plastid	68.16	62.16
Zm00001d047527_P004	Maize	plastid	70.28	61.85
VIT_13s0047g01210.t01	Wine grape	plasma membrane	57.92	55.75
VIT_16s0013g01900.t01	Wine grape	mitochondrion	4.91	42.65
VIT_14s0066g01180.t01	Wine grape	mitochondrion	34.8	34.83
VIT_17s0000g04450.t01	Wine grape	mitochondrion, plasma membrane	34.46	33.78
VIT_09s0002g01730.t01	Wine grape	mitochondrion	35.05	33.69
VIT_01s0011g02480.t01	Wine grape	mitochondrion	33.36	33.22
VIT_00s0125g00410.t01	Wine grape	mitochondrion, plasma membrane	33.02	31.71
VIT_13s0074g00480.t01	Wine grape	plasma membrane	15.41	30.08
VIT_18s0075g00840.t01	Wine grape	cytosol	3.56	28.57
VIT_00s0188g00070.t01	Wine grape	cytosol, nucleus, peroxisome	5.17	25.52
Bra030891.1-P	Field mustard	plasma membrane	2.96	16.67
VIT_00s0189g00030.t01	Wine grape	extracellular, mitochondrion, plasma membrane	32.77	12.58

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100244740	wikigene:100244740	Gene3D:2.70.150.10	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ProteinID:CCB44764	ProteinID:CCB44764.1	UniProt:F6GXW3	EMBL:FN594967	GO:GO:0000166	GO:GO:0000287
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003824	GO:GO:0004012
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005886	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0043565	GO:GO:0045332	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100244740	wikigene:LOC100244740	InterPro:P-type_ATPase_IV
InterPro:P-type_ATPase_N	PFAM:PF00122	PFAM:PF00702	PFAM:PF16209	PFAM:PF16212	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF74	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI000210A02E
ArrayExpress:VIT_08s0058g01400	EnsemblPlantsGene:VIT_08s0058g01400	EnsemblPlants:VIT_08s0058g01400.t01	RefSeq:XP_002268006	RefSeq:XP_002268006.2	SEG:seg

Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6GXW3]

Coordinates

chr8:-:10849629..10863543

Molecular Weight (calculated)

133867.0 Da

IEP (calculated)

6.482

GRAVY (calculated)

-0.076

Length

1181 amino acids

Sequence
(BLAST)

0001: MELHNNSTSF EISGASSRVQ EKWNKPQRSR HKSVQFEEDL IHEEDPRLIY INDWRRTNDK YEFTGNGIRT SKYTLITFLP KNIFIQFHRV AYLYFLGIAA
0101: LNQLPPLAVF GRTVSLFPLL FVLCVTAVKD GYEDWRRHRS DEVENNREAL VLYAGQFQKK KWKKIQAGEV VKIYADETIP CDMVLLGTSD PSGIAYIQTM
0201: NLDGESNLKT RYARQETASM VLDVGAISGL IKCEQPNRNI YEFKANMEFN GQRFPLNQSN IILRGCQLKN TEWVIGVVVY AGQETKAMLN SAASPSKRSK
0301: LEIYMNRETL WLSFFLFIMC LAVAVGMGLW LERHKNQLDT LPYYRKRYFT TGRFNGKSYK YYGIYMETFF SFLSSIIVFQ IMIPISLYIT MELVRLGQSY
0401: FMIEDKHMYD SSSDTRFQCR SLNINEDLGQ VRYVFSDKTG TLTENKMEFR RASVYGKNYG SFLIRADPLE ENVHATTVEG RGQKLKSQIA IDNELMELLH
0501: KDLAGDERIA AHEFFLTLAA CNTVIPIPTS SASCTESGLH EYVGAINYQG ESPDEQALVA AASAYGYTLF ERTSGHIVID VNGEKLRLDL LGLHEFDSVR
0601: KRMSVVIRFP NDTVKVLVKG ADSSMFSILA EDSGRNGHVR PATQSHLTEY SSQGLRTLVV AARDLTDEEL SEWQCKYEDA STSLTDRSVK LRQTAAFIEC
0701: KLNLLGATGI EDKLQDGVPE AIESLRQAGI KVWVLTGDKQ ETAISIGLSS KLLTTDMNQI IINGNSEDEC RSLLADAKAK YFVKSLDCGS KYLKYKKDAE
0801: VTLDNTKSST MPQQHSGKEE EMLSTSHALI IDGNSLVYIL EKDLESELFD LATSCKVVLC CRVAPLQKAG IVDLIKSRTD DMTLAIGDGA NDVSMIQMAD
0901: VGVGICGQEG RQAVMASDFA MGQFRFLKRL LLVHGHWNYQ RVGYLVLYNF YRNAVFVLML FWYILSTAFS TTSALTDLSS VFYSLIYTSI PTIVVGILDK
1001: DLNDETLLQY PRLYGAGHRQ ESYNMRLFWI TMIDTLWQSL VIFYIPVFIY SDSSIDIWSM GSLWTITVVI LVNVHLAMDV QRWIFITHVA VWGSIIITYA
1101: CLIAVDSIPI FPNYGTIYHL AKSPSYWLSI FLILTIALLP RFLFKVIRQN FWPSDIQIAR EAEILGDQPD NLPSKSSKGS G

Best Arabidopsis Sequence Match ( AT5G04930.1 )
(BLAST)

0001: MDPRKSIDKP PHHDPILGVS SRWSVSSKDN KEVTFGDLGS KRIRHGSAGA DSEMLSMSQK EIKDEDARLI YINDPDRTNE RFEFTGNSIK TAKYSVFTFL
0101: PRNLFEQFHR VAYIYFLVIA VLNQLPQLAV FGRGASIMPL AFVLLVSAIK DAYEDFRRHR SDRVENNRLA LVFEDHQFRE KKWKHIRVGE VIKVQSNQTL
0201: PCDMVLLATS DPTGVVYVQT TNLDGESNLK TRYAKQETLL KAADMESFNG FIKCEKPNRN IYGFQANMEI DGRRLSLGPS NIILRGCELK NTAWALGVVV
0301: YAGGETKAML NNSGAPSKRS RLETRMNLEI ILLSLFLIVL CTIAAATAAV WLRTHRDDLD TILFYRRKDY SERPGGKNYK YYGWGWEIFF TFFMAVIVYQ
0401: IMIPISLYIS MELVRIGQAY FMTNDDQMYD ESSDSSFQCR ALNINEDLGQ IKYLFSDKTG TLTDNKMEFQ CACIEGVDYS DREPADSEHP GYSIEVDGII
0501: LKPKMRVRVD PVLLQLTKTG KATEEAKRAN EFFLSLAACN TIVPIVSNTS DPNVKLVDYQ GESPDEQALV YAAAAYGFLL IERTSGHIVI NVRGETQRFN
0601: VLGLHEFDSD RKRMSVILGC PDMSVKLFVK GADSSMFGVM DESYGGVIHE TKIQLHAYSS DGLRTLVVGM RELNDSEFEQ WHSSFEAAST ALIGRAGLLR
0701: KVAGNIETNL RIVGATAIED KLQRGVPEAI ESLRIAGIKV WVLTGDKQET AISIGFSSRL LTRNMRQIVI NSNSLDSCRR SLEEANASIA SNDESDNVAL
0801: IIDGTSLIYV LDNDLEDVLF QVACKCSAIL CCRVAPFQKA GIVALVKNRT SDMTLAIGDG ANDVSMIQMA DVGVGISGQE GRQAVMASDF AMGQFRFLVP
0901: LLLVHGHWNY QRMGYMILYN FYRNAVFVLI LFWYVLFTCY TLTTAITEWS SVLYSVIYTA IPTIIIGILD KDLGRQTLLD HPQLYGVGQR AEGYSTTLFW
1001: YTMIDTIWQS AAIFFIPMFA YWGSTIDTSS LGDLWTIAAV VVVNLHLAMD VIRWNWITHA AIWGSIVAAC ICVIVIDVIP TLPGYWAIFQ VGKTWMFWFC
1101: LLAIVVTSLL PRFAIKFLVE YYRPSDVRIA REAEKLGTFR ESQPVGVEMN LIQDPPRR

Arabidopsis Description

ALA1Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UBN1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.