Factsheet for VIT_00s0125g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054638	Potato	plasma membrane	71.87	71.06
Solyc02g069430.2.1	Tomato	plasma membrane	28.21	70.53
Solyc02g069420.2.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	44.72	68.49
VIT_09s0002g01730.t01	Wine grape	mitochondrion	59.43	59.48
VIT_14s0066g01180.t01	Wine grape	mitochondrion	51.71	53.9
VIT_01s0011g02480.t01	Wine grape	mitochondrion	51.38	53.29
VIT_17s0000g04450.t01	Wine grape	mitochondrion, plasma membrane	51.22	52.28
VIT_13s0074g00480.t01	Wine grape	plasma membrane	25.37	51.57
VIT_16s0013g01900.t01	Wine grape	mitochondrion	5.37	48.53
VIT_18s0075g00840.t01	Wine grape	cytosol	4.23	35.37
VIT_08s0058g01400.t01	Wine grape	plasma membrane	31.71	33.02
VIT_13s0047g01210.t01	Wine grape	plasma membrane	32.03	32.11
VIT_00s0188g00070.t01	Wine grape	cytosol, nucleus, peroxisome	5.61	28.87
VIT_00s0189g00030.t01	Wine grape	extracellular, mitochondrion, plasma membrane	36.34	14.53

Protein Annotations

EntrezGene:100264967	wikigene:100264967	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB46510	ProteinID:CCB46510.1
ncoils:Coil	UniProt:F6H2R8	EMBL:FN595230	GO:GO:0000139	GO:GO:0000166	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	GO:GO:0048194	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100264967	wikigene:LOC100264967	InterPro:P-type_ATPase_IV
InterPro:P-type_ATPase_N	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF77	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI0001985C35
ArrayExpress:VIT_00s0125g00410	EnsemblPlantsGene:VIT_00s0125g00410	EnsemblPlants:VIT_00s0125g00410.t01	RefSeq:XP_002270446	RefSeq:XP_002270446.1	SEG:seg

Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6H2R8]

Coordinates

chrUn:-:2059061..2066119

Molecular Weight (calculated)

139358.0 Da

IEP (calculated)

6.850

GRAVY (calculated)

0.018

Length

1230 amino acids

Sequence
(BLAST)

0001: MGELSGRKKG KLRWSKLYSF SCLRPSISDP SPVQKLFGQP GFSRVVFCNE SQLHKIKPYK YPNNYISTTK YNFVTFLPKA LFEQFRRVAN LYFLLAAALS
0101: ITSLAPFNPV SLIAPLVFVV GISMLKEAVE DWHRFLQDLN VNSRNVKAHT GNGTFINKQW QSLCVGDVIK VHKNEYFPSD LLLLSSSYED GLCYVETMNL
0201: DGETNLKAKR CLEATLGLDE EPELKNFTAT IRCEDPNPSL YTFVGNLEFD NKSYPLSPAQ VLLRDSKLRN TDYIYGVVIF SGPDTKVVRN STISPSKRSQ
0301: IERKMDHVIY LLFSMLVLIS LVTAMGCALV VKSDMVNWWY LRLQEGDPFF SPSKPFVSGF LQFIRALILY GYLIPISLYV SIELVKVLQA TLINKDIEMY
0401: DEVTCKSVEA RTSNLNEELG QVEMILSDKT GTLTCNQMEF RKCSIAGISY GGDVNEVDLA ASKRINADME RYQFSFARSD SITESFEMLE FSVADISIQK
0501: AALGGKEDID NLLTGNSRIS HAGKESVIKG FNFKDDRLTG KSWIWTSNSY DMTMFFRVMA LCHTGIPIEE DQTGKLKYEA ESPEEVAFLI ASQEFGFKFL
0601: RRTQSVMVLK ELDPSSGFEV EREYKLLNLL EFSSSRKRMS VIVSNDDGQI FLLCKGADSI ILDRLDDHGR SYQQATSSHL SDYAEDGLRT LVFAYRKLEV
0701: AEYENWNSIF TRAKTTVGPK RDELLESASE MIEKDLILLG AAAVEDKLQK GVPECIDKLA QAGLKFWLLT GDKKETAVNI GFACSLLGHN MRQFHLSLSK
0801: EVENSNQVQA MKDDILHQIE SFSLAMSEER SKNAPFALIV DGKALEIALR SDVKNHFFCL AVNCISVICC RVSPKQKALI TRSVKAYTGR ITLAIGDGAN
0901: DVGMIQEADI GVGISGMEGM QAVMASDFSL PQFHFLERLL LVHGHWCYKR ISKMILYFVY KNILLGLTLF YYELYTAFSG EVLYDDWYMV LFNVMLTSLP
1001: VISLGVLEQD VSSEVCLQFP ALYQQGQRNI HFSWVRIIGW ILNGVVTSLV ILTMNIRILS PTAFREEGDV ADMAHLGAIT YTCVIWTVNC QIALIISHFT
1101: WIQHVFIWGS ILSWYILLLI YGALPPSYSN RAFHLLVEAI GPAPKYWMVT LLVVVVSLLP YIIHLVIQRT FYPMDDHVIQ EMKHFRKDIM DNAMWLREQN
1201: NSKTTTHVGF SARVEAKISR LKQQLHHKKA

Best Arabidopsis Sequence Match ( AT3G13900.1 )
(BLAST)

0001: MGRRRIRSRI RKSHFYTFKC LRPKTLEDQG PHIINGPGYT RIVHCNQPHL HLAKVLRYTS NYVSTTRYNL ITFLPKCLYE QFHRVANFYF LVAAILSVFP
0101: LSPFNKWSMI APLIFVVGLS MGKEALEDWR RFMQDVKVNS RKATVHRGDG DFGRRKWKKL RVGDVVKVEK DQFFPADLLL LSSSYEDGIC YVETMNLDGE
0201: TNLKVKRCLD VTLPLERDDT FQSFSGTIKC EDPNPNLYTF VGNLEYDGQV YPLDPSQILL RDSKLRNTSY VYGVVVFTGH DTKVMQNSTK SPSKRSRIEK
0301: RMDYIIYTLF ALLVLVSFIS SLGFAVMTKM HMGDWWYLRP DKPERLTNPR NPFHAWVVHL ITAVLLYGYL IPISLYVSIE LVKVLQATFI NQDLQMYDSE
0401: SGTPAQARTS NLNEELGQVD TILSDKTGTL TCNQMDFLKC SIAGTSYGVR ASEVELAAAK QMAIDLDEEQ GEEVTHLPRT RGRMHGYAKM PSKTSSDIEL
0501: ETVITATDEG DQTQSTGIKG FSFEDQRLMG GNWLNEPNSD DILMFLRILA VCHTAIPEVD EDTGKCTYEA ESPDEVAFLV AAGEFGFEFT KRTQSSVFIS
0601: ERHSGQPVER EYKVLNVLDF TSKRKRMSVI VRDEKGQILL LCKGADSIIF ERLSKNGKNY LEATSKHLNG YGEAGLRTLA LSYRKLDETE YSIWNSEFHK
0701: AKTSVGADRD EMLEKVSDMM EKELILVGAT AVEDKLQKGV PQCIDKLAQA GLKIWVLTGD KMETAINIGY ACSLLRQGMK QIYIALRNEE GSSQDPEAAA
0801: RENILMQIIN ASQMIKLEKD PHAAFALIID GKTLTYALED DIKYQFLALA VDCASVICCR VSPKQKALVT RLAKEGTGKT TLAIGDGAND VGMIQEADIG
0901: VGISGVEGMQ AVMASDFSIA QFRFLERLLV VHGHWCYKRI AQMICYFFYK NITFGLTLFY FEAFTGFSGQ AIYNDSYLLL FNVILTSLPV IALGVFEQDV
1001: SSEVCLQFPA LYQQGPKNLF FDWYRIIGWM ANGVYASVVI FSLNIGIFHV QSFCSGGQTA DMDAMGTAMF TCIIWAVNVQ IALTMSHFTW IQHVLIWGSI
1101: VTWYIFLALF GMLPPKVSGN IFHMLSETLA PAPIFWLTSL LVIAATTLPY LAYISFQRSL NPLDHHIIQE IKHFRIDVQD ECMWTRERSK AREKTKIGVT
1201: ARVDAKIRQL RGRLQRKHSI LSVMSGLSGV SASTDTTSTT QHS

Arabidopsis Description

ALA7Probable phospholipid-transporting ATPase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVK9]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.