Factsheet for PGSC0003DMT400012383

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g062780.2.1	Tomato	mitochondrion	98.76	98.76
PGSC0003DMT400083890	Potato	mitochondrion	83.02	83.43
PGSC0003DMT400006627	Potato	mitochondrion	79.64	79.83
VIT_09s0002g01730.t01	Wine grape	mitochondrion	79.39	78.36
GSMUA_Achr7P09160_001	Banana	mitochondrion	65.87	76.39
KRH23275	Soybean	mitochondrion	76.67	75.98
KRH44107	Soybean	mitochondrion	76.75	75.63
KRH10041	Soybean	mitochondrion	76.26	75.57
KRH47082	Soybean	mitochondrion	75.93	74.82
Os06t0565900-01	Rice	plasma membrane	40.07	74.54
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	67.11	74.34
GSMUA_Achr7P13550_001	Banana	mitochondrion, plasma membrane	65.29	74.09
Bra030991.1-P	Field mustard	mitochondrion	73.78	73.48
CDY21747	Canola	mitochondrion, plasma membrane	73.7	73.4
CDX81828	Canola	mitochondrion, plasma membrane	73.54	73.23
AT1G17500.1	Thale cress	mitochondrion, plasma membrane	72.96	72.78
Bra016040.1-P	Field mustard	mitochondrion	73.12	72.35
Zm00001d036968_P010	Maize	mitochondrion, plasma membrane	72.63	72.33
TraesCS7D01G362300.1	Wheat	mitochondrion	72.55	72.31
CDX96429	Canola	mitochondrion	73.04	72.27
TraesCS7A01G360700.2	Wheat	mitochondrion	72.38	72.14
Zm00001d046194_P003	Maize	mitochondrion, plasma membrane	73.04	72.09
OQU76591	Sorghum	mitochondrion, plasma membrane	72.55	72.07
AT3G13900.1	Thale cress	mitochondrion, plasma membrane	73.7	71.92
AT1G72700.2	Thale cress	mitochondrion, plasma membrane	72.79	71.91
CDX72937	Canola	mitochondrion, plasma membrane	72.71	71.82
CDY49858	Canola	mitochondrion, plasma membrane	69.74	71.82
AT1G54280.3	Thale cress	mitochondrion	73.29	71.69
CDY08221	Canola	mitochondrion	72.55	71.66
CDY55204	Canola	mitochondrion	72.96	71.66
CDY26129	Canola	mitochondrion	72.38	71.5
HORVU7Hr1G087590.10	Barley	mitochondrion	72.38	71.44
GSMUA_Achr2P19460_001	Banana	mitochondrion, plasma membrane	58.78	71.37
GSMUA_Achr6P00940_001	Banana	mitochondrion, plasma membrane	63.23	71.28
CDY53865	Canola	mitochondrion, plasma membrane	69.66	71.19
Bra008042.1-P	Field mustard	mitochondrion, plasma membrane	69.66	71.13
CDY02467	Canola	mitochondrion	72.71	71.01
CDY10603	Canola	mitochondrion	72.63	70.93
Bra014364.1-P	Field mustard	mitochondrion	72.3	70.84
TraesCS7B01G267000.2	Wheat	mitochondrion	72.47	70.04
VIT_13s0074g00480.t01	Wine grape	plasma membrane	32.32	64.79
PGSC0003DMT400064690	Potato	mitochondrion	56.72	57.57
PGSC0003DMT400019314	Potato	mitochondrion	56.55	57.55
PGSC0003DMT400001292	Potato	cytosol	49.46	56.66
PGSC0003DMT400054638	Potato	plasma membrane	58.04	56.59
PGSC0003DMT400053816	Potato	cytosol, plasma membrane, plastid	9.07	54.46
PGSC0003DMT400080209	Potato	plasma membrane	20.61	33.88
PGSC0003DMT400070787	Potato	plastid	31.99	33.13
PGSC0003DMT400023828	Potato	plasma membrane	18.8	30.24

Protein Annotations

EntrezGene:102589917	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015914	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016787	GO:GO:0045332	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	UniProt:M1A164	InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N	PFAM:PF13246	PFAM:PF16209
PFAM:PF16212	EnsemblPlantsGene:PGSC0003DMG400004853	PGSC:PGSC0003DMG400004853	EnsemblPlants:PGSC0003DMT400012383	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR24092	PANTHER:PTHR24092:SF137	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652	TMHMM:TMhelix	UniParc:UPI0002969ED7
RefSeq:XP_006357389.1	SEG:seg	:	:	:	:

Description

Phospholipid-transporting ATPase [Source:PGSC_GENE;Acc:PGSC0003DMG400004853]

Coordinates

chr6:-:48634380..48641311

Molecular Weight (calculated)

137984.0 Da

IEP (calculated)

7.682

GRAVY (calculated)

-0.067

Length

1213 amino acids

Sequence
(BLAST)

0001: MARGSSKRAK IQWSNLYTFG CYRPRTDEEE GPHRLGAGFS RVVHCNQSHL HEKKPFKYRT NYISTTKYNF ITFLPKAIFE QFRRVANLYF LLAAILSATT
0101: NLSPFSSVSM IAPLVFVVGL SMAKEALEDS RRFIQDMKVN LRKARLRKEG GVFGLRPWMK IRVGDIVKVE KDQFFPADLL LLSSSYQDGI CYVETMNLDG
0201: ETNLKVKRAL EVTLPLDDNE AFKEFRATIK CEDPNPNLYT FVGNLEYDRQ IYPLDPTQIL LRDSKLRNTA YIYGVVIFTG HDSKVMQNST ESPSKRSRIE
0301: LQMDKIIYVL FTLLVVISFI SSIGFAVKTR LNMPSWWYMQ PMDKKNNTTD PNKPELSAIF HLITALILYG YLIPISLYVS IEVVKVLQAL FINQDINMYD
0401: DETGTPAQAR TSNLNEELGQ VDTILSDKTG TLTCNQMDFL KCSIAGSAYG TRASDVELAA AKQMAEDLGG QDPDISRRRS SEIELERVVT SKDEIRPAIK
0501: GFSFEDSRLM KGNWMKEPNA DVILLFFRIL SLCHTAIPEL NEETGSYNFE AESPDEAAFL VAAREFGFEF CKRTQSRVYI REKYPSFQEP TEREFKVLNL
0601: LDFTSKRKRM SVIIRDESGQ ILLLCKGADS IIYERLAKNG RRFEEATTKH LNEYGEAGLR TLVLAYKKLD ETEYSAWNEE FTKAKASISG DRDAMLECLS
0701: DMMEKELILI GATAVEDKLQ KGVPQCIDKL AQAGLKIWVL TGDKMETAIN IGYACSLLRH GMRQICITAM NADSVERSSE QAIRENILMQ ITNASQMIKL
0801: EKDPHAAFAL IIDGKTLTYA LAYDMKHHFL NLAVSCASVI CCRVSPKQKA LVTRLVKEGT GKTTLAIGDG ANDVGMIQEA DIGVGISGAE GMQAVMASDF
0901: AIAQFRFLER LLVVHGHWCY KRIAQMICYF FYKNIAFGLT LFYFEAFAGF SGQSVYDDSY MILFNVILTS LPVIALGVFE QDVPSEVCLQ FPALYQQGPK
1001: NLFFDWYRIF GWLGNGVYTS LIVFFLNIII FYDQAFQAEG QTADLTAMGT TMFTCIVWAV NCQIALTMSH FTWIQHIFIW GSIASWYLFL LIYGMIAPDY
1101: SKYAFRILVE ALAPAPVYWC TTLLVIVVCT LPYLAHISYQ RSFNPMDHHI IQEIIYYKKD VKDHHMWKRE RSKARQSTNI GFTARVDAKI RQLRGRLHKK
1201: YTSMGSQIEL TQP

Best Arabidopsis Sequence Match ( AT1G54280.1 )
(BLAST)

0001: MARRRIRSRI RKSHFYTFRC LRPKTLDDQG PHVINGPGYT RIVHCNQPHL HLATKLIRYR SNYVSTTRYN LLTFLPKCLY EQFHRVANFY FLVAAILSVF
0101: PLSPFNKWSM IAPLVFVVGL SMGKEALEDW RRFMQDVEVN SRKASVHKGS GDFGRRTWKR IRVGDIVRVE KDEFFPADLL LLSSSYEDGI CYVETMNLDG
0201: ETNLKVKRCL DATLALEKDE SFQNFSGTIK CEDPNPNLYT FVGNLECDGQ VYPLDPNQIL LRDSKLRNTA YVYGVVVFTG HDTKVMQNST KSPSKRSRIE
0301: KRMDYIIYTL FALLLTVSFI SSLGFAVMTK LLMAEWWYLR PDKPESLTNP TNPLYAWVVH LITALLLYGY LIPISLYVSI EVVKVLQAHF INQDLQLYDS
0401: ESGTPAQART SNLNEELGQV DTILSDKTGT LTCNQMDFLK CSIAGTSYGV RASEVELAAA KQMAMDLEEK GEEVANLSMN KGRTQRYAKL ASKTSSDFEL
0501: ETVVTASDEK DQKQNTGVKG FSFEDNRLMN ENWLNEPNSD DILMFFRILA VCHTAIPEVD EDTGMCTYEA ESPDEVAFLV ASREFGFEFT KRTQSSVFIA
0601: ERFSSSGQPV DREYKILNLL DFTSKRKRMS AIVRDEEGQI LLLCKGADSI IFERLSKSGK EYLGATSKHL NVYGEAGLRT LALGYRKLDE TEYAAWNSEF
0701: HKAKTSVGAD RDEMLEKVSD MMEKELILVG ATAVEDKLQK GVPQCIDNLA QAGLKIWVLT GDKMETAINI GYACSLLRQG MKQISISLTN VEESSQNSEA
0801: AAKESILMQI TNASQMIKIE KDPHAAFALI IDGKTLTYAL KDDVKYQFLA LAVDCASVIC CRVSPKQKAL VTRLAKEGTG KTTLAIGDGA NDVGMIQEAD
0901: IGVGISGVEG MQAVMASDFS IAQFRFLERL LVVHGHWCYK RIAQMICYFF YKNITFGLTL FYFECFTGFS GQSIYNDSYL LLFNVVLTSL PVISLGVFEQ
1001: DVPSDVCLQF PALYQQGPKN LFFDWYRILG WMGNGVYASI VIFTLNLGIF HVQSFRSDGQ TADMNAMGTA MFTCIIWAVN VQIALTMSHF TWIQHVMIWG
1101: SIGAWYVFLA LYGMLPVKLS GNIFHMLVEI LAPAPIFWLT SLLVIAATTL PYLFHISYQR SVNPLDHHII QEIKHFRIDV EDERMWKREK SKAREKTKIG
1201: FTARVDAKIR QLRGRLQRKH SVLSVMSGTS SNDTPSSNSQ

Arabidopsis Description

ALA6Phospholipid-transporting ATPase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.