CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13589	Canola	plastid	81.06	82.23
CDY66920	Canola	cytosol	43.89	74.92
AT3G25820.1	Thale cress	plastid	78.76	74.17
AT3G25830.1	Thale cress	plastid	78.76	74.17
AT3G25810.1	Thale cress	plastid	74.69	70.57
CDX83558	Canola	plastid	73.1	70.12
CDY13587	Canola	plastid	72.57	69.61
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	80.18	66.33
CDX76827	Canola	plastid	61.77	62.43
CDY53129	Canola	cytosol	27.79	61.33
CDY53648	Canola	cytosol	27.79	61.33
CDX90785	Canola	plastid	62.65	59.7
CDY21487	Canola	plastid	60.71	57.65
CDX83208	Canola	plastid	60.53	57.48
VIT_13s0067g03770.t01	Wine grape	cytosol	35.04	57.06
VIT_13s0067g00300.t01	Wine grape	cytosol	15.58	55.7
CDY54750	Canola	cytosol	39.47	55.61
VIT_13s0067g00090.t01	Wine grape	cytosol	34.34	55.43
CDY62515	Canola	cytosol	38.94	54.86
VIT_13s0067g00320.t01	Wine grape	cytosol	11.15	53.39
VIT_00s2271g00010.t01	Wine grape	cytosol	35.58	50.89
CDY68676	Canola	cytosol	32.21	48.4
CDY15827	Canola	cytosol	13.1	47.74
VIT_00s0724g00010.t01	Wine grape	cytosol	35.93	47.54
VIT_13s0067g03740.t01	Wine grape	cytosol	35.4	47.39
VIT_13s0084g00010.t01	Wine grape	cytosol	44.25	45.37
VIT_13s0067g03700.t01	Wine grape	cytosol	44.96	44.88
PGSC0003DMT400089009	Potato	cytosol	12.74	44.72
GSMUA_Achr4P07690_001	Banana	cytosol	13.45	44.44
CDY14934	Canola	cytosol	1.24	43.75
Solyc02g079840.1.1	Tomato	cytosol	41.24	43.31
PGSC0003DMT400055897	Potato	cytosol	9.2	42.98
VIT_13s0067g00370.t01	Wine grape	plastid	43.01	41.19
VIT_13s0067g00130.t01	Wine grape	plastid	37.7	40.88
CDY68788	Canola	endoplasmic reticulum, golgi	30.27	40.71
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	18.05	40.64
VIT_13s0067g03790.t01	Wine grape	plastid	41.59	39.63
VIT_13s0019g00060.t01	Wine grape	plastid	41.59	39.56
VIT_13s0067g03830.t01	Wine grape	plastid	27.43	35.23
KRH22502	Soybean	cytosol	9.56	30.86
CDY12909	Canola	cytosol	11.33	27.59
CDX95274	Canola	cytosol	6.02	25.56
CDY39124	Canola	cytoskeleton, cytosol, plastid	24.6	24.87
CDY18347	Canola	cytosol	7.26	24.7
CDY68962	Canola	cytosol	21.77	24.4
CDY06577	Canola	cytosol	14.16	24.39
CDX87217	Canola	plastid	25.66	24.13
CDY27296	Canola	cytosol	8.32	24.1
CDY09324	Canola	plastid	25.31	23.87
CDY71184	Canola	cytosol	13.81	23.35
CDY02143	Canola	plastid	22.83	23.33
CDY69236	Canola	cytosol	19.82	23.14
CDX75776	Canola	plastid	23.89	23.0
CDX82478	Canola	cytosol	21.59	22.72
CDX76457	Canola	plastid	24.07	22.63
CDX98661	Canola	cytosol	22.3	22.62
CDY13053	Canola	extracellular	22.12	22.6
CDX98659	Canola	plastid	24.6	22.49
CDY23121	Canola	cytosol	15.04	22.37
CDY49723	Canola	plastid	23.54	22.32
CDX98470	Canola	plastid	23.01	22.26
CDY39119	Canola	plastid	23.72	22.26
CDX82475	Canola	plastid	22.83	22.2
CDY70719	Canola	cytosol	13.27	21.55
CDX74453	Canola	cytosol	20.18	21.47
CDY32356	Canola	plastid	23.54	21.45
CDX76471	Canola	plastid	22.83	21.39
CDY42473	Canola	cytosol	21.24	21.35
CDY41707	Canola	plastid	21.95	21.31
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	14.34	21.26
CDY63249	Canola	cytosol	20.89	21.22
CDY61957	Canola	plastid	14.16	21.16
CDY54565	Canola	plastid	21.42	21.04
CDY14933	Canola	cytosol	17.88	20.7
CDX95273	Canola	plastid	15.22	20.53
CDY12910	Canola	plastid	5.31	20.13
CDY67821	Canola	cytosol	6.73	19.59
CDY09325	Canola	plastid	8.85	18.52
CDX82477	Canola	plastid	9.56	18.0
CDY01639	Canola	cytosol	6.02	17.62
CDX75775	Canola	plastid	14.87	17.36

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078D389	EnsemblPlants:CDX83560	ProteinID:CDX83560
ProteinID:CDX83560.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00139207001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EE83DF	SEG:seg	:	:	:	:

Description

BnaC07g23000D

Coordinates

chrLK031833:+:667233..670101

Molecular Weight (calculated)

65762.9 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.251

Length

565 amino acids

Sequence
(BLAST)

001: MASLYMTSAL IYQNVITHNN FRLPSFICRS MTKMTPDNVS VDVRRRRSGN YQPSPWDHSY LLSINNKYAK DQEKVIARDS LKEKTICKNL AFHIILRSIR
101: KYDKEEDLHA TSLEIRLLRQ HGFHVSEDIF DVIINKIESE TFKGDDINSI ISLYEASYLP TKSDTKLREV IRPFATEQIR KFVDSGHDGE TCNLEVREKA
201: IHALEMPYHW RMRRLETRWY IAVYEKKHDM NIVLLEFAKI DFNIVQIAHQ EDLKYVSSWW KETCLVNQLP FVRDRIVENY FWTVGLIYEP QFGNIRRIMS
301: IVNALVTTID DIYDIYGTLE ELELFTDLVD NWDVNRLDEL PEYMRLCFLI LFNEINSIGC DILKYKNIDV IPFLKKSWAD LCNTYLVEAK WYKKGYKPSV
401: EEYMQNAWIS ISAPTILIHF YCIFSDQISV QILESLSQHR QEIVRCAATI LRLANDLGTS PELARGDVLK SAQCYMHETG ASEEEAHAHV QQMICDTWDE
501: INSETITART SLLLSRGFVE AAVNLARMSQ CMYQYGDGHG CPDKAKTVER VTSLLVNPVP LDGLN

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.