CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012955.1-P	Field mustard	plastid	97.83	90.32
CDX87217	Canola	plastid	79.93	73.54
CDY39124	Canola	cytoskeleton, cytosol, plastid	56.06	55.46
CDY39119	Canola	plastid	58.95	54.15
CDX98470	Canola	plastid	56.24	53.25
CDX82478	Canola	cytosol	51.36	52.89
CDY32356	Canola	plastid	58.59	52.26
CDX82475	Canola	plastid	52.62	50.09
CDX82477	Canola	plastid	27.12	50.0
CDX75776	Canola	plastid	52.08	49.06
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	33.27	48.29
CDY06577	Canola	cytosol	27.67	46.65
CDX75775	Canola	plastid	38.34	43.8
CDY67821	Canola	cytosol	14.65	41.75
CDY69236	Canola	cytosol	33.82	38.64
PGSC0003DMT400070310	Potato	cytosol	21.52	38.26
CDY68962	Canola	cytosol	34.54	37.9
CDX95274	Canola	cytosol	8.86	36.84
CDY27296	Canola	cytosol	12.84	36.41
PGSC0003DMT400079785	Potato	cytosol	20.43	36.33
CDX98661	Canola	cytosol	35.62	35.37
CDY71184	Canola	cytosol	21.34	35.33
CDY41707	Canola	plastid	35.62	33.85
CDY42473	Canola	cytosol	34.36	33.81
CDY18347	Canola	cytosol	10.13	33.73
PGSC0003DMT400050941	Potato	cytosol	15.19	33.6
CDX74453	Canola	cytosol	32.01	33.33
CDY14933	Canola	cytosol	29.29	33.2
CDY70719	Canola	cytosol	20.61	32.76
CDY63249	Canola	cytosol	32.55	32.37
CDY49723	Canola	plastid	34.72	32.21
PGSC0003DMT400075074	Potato	cytosol	12.12	32.21
CDX76471	Canola	plastid	35.08	32.17
PGSC0003DMT400047124	Potato	cytosol	18.08	32.15
CDX76457	Canola	plastid	34.72	31.95
CDX95273	Canola	plastid	23.87	31.5
CDY09324	Canola	plastid	34.0	31.39
CDY14934	Canola	cytosol	0.9	31.25
CDX98659	Canola	plastid	34.54	30.91
CDY66920	Canola	cytosol	18.44	30.82
Solyc01g101190.2.1	Tomato	cytosol	30.56	30.62
CDY54565	Canola	plastid	31.83	30.61
CDY13053	Canola	extracellular	30.38	30.38
CDY09325	Canola	plastid	14.83	30.37
CDY53129	Canola	cytosol	13.56	29.3
CDY53648	Canola	cytosol	13.56	29.3
Solyc01g101220.1.1	Tomato	cytosol	8.68	28.57
CDY23121	Canola	cytosol	19.53	28.42
CDY54750	Canola	cytosol	20.43	28.18
CDY62515	Canola	cytosol	20.43	28.18
VIT_18s0001g04200.t01	Wine grape	cytosol	5.79	26.89
CDX90785	Canola	plastid	27.85	25.97
CDX76827	Canola	plastid	26.04	25.76
CDY13587	Canola	plastid	26.22	24.62
CDY21487	Canola	plastid	26.22	24.37
CDX83558	Canola	plastid	25.86	24.28
CDY68676	Canola	cytosol	16.46	24.2
CDX83208	Canola	plastid	26.04	24.2
CDY15827	Canola	cytosol	6.69	23.87
VIT_18s0001g04510.t01	Wine grape	plastid	13.2	23.86
GSMUA_Achr6P24330_001	Banana	cytosol	5.97	23.4
CDY01639	Canola	cytosol	8.14	23.32
CDX83560	Canola	plastid	23.33	22.83
GSMUA_Achr6P24340_001	Banana	cytosol	5.97	22.15
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	27.31	22.11
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	12.3	21.94
Os02t0458100-01	Rice	plastid	15.19	21.48
CDY13589	Canola	plastid	21.16	21.01
CDY12909	Canola	cytosol	8.68	20.69
KRG93110	Soybean	mitochondrion	10.67	19.93
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	8.86	19.52
CDY68788	Canola	endoplasmic reticulum, golgi	14.29	18.81
VIT_18s0001g05430.t01	Wine grape	cytosol	14.1	16.18
CDY12910	Canola	plastid	4.16	15.44
CDY61957	Canola	plastid	9.95	14.55

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078ERI5	EnsemblPlants:CDY02143	ProteinID:CDY02143
ProteinID:CDY02143.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00113540001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EE68FE	SEG:seg	:	:	:	:

Description

BnaA03g40240D

Coordinates

chrLK031932:+:348627..351103

Molecular Weight (calculated)

64428.0 Da

IEP (calculated)

5.618

GRAVY (calculated)

-0.207

Length

553 amino acids

Sequence
(BLAST)

001: MQTSSMSMSF GPKIIPRTHK VTLYQKTKLS LLPRPLLQNQ TLPRKPTKQD SFFVMATSND LESTRPLAQF TPTFLGDHHF SVPVNDYEID AIEHEIESVM
101: KPCVRDMLMS FHTCTKDKIR LIHLLISLAI SHYFENEIEE ILNKAFGELE ILTDTEDDLE TISIMFEVFR LYGHKMPCVV FERFKWEHDG KFKESVVGDV
201: RGMLQLYRCI EIAVAREYIS FYKEEEYHDE KLLKFAKLNF SYCQLHYIKE LKSLTKWWKE IDLASKLPYT FRDRIAEYGL GIVGIYLEPR YSLARVICTK
301: ISMIMTVVDD TYDAYGTLPE VTSFTDALQR WDIGAIEDLP SYMQIIFRNL WEIIQDIERE MSSLGRHGGV QPTINEIKSL TKEGYIKIAK WARTGHVPSF
401: EEYMEVGVVT AAMDDMTLYI FLGMEDCDEK IMYEWVASKP KFIHAFNVVL RLTNDIATFE EELKRGEVAN GVNCYMKQHG VTQEEAVTEL KKMIKDHHEI
501: MMEEFFKASS TVPRQILVRV FNLARVIYLF YKEGDGFGHP GENLKDQFTS LFT

Best Arabidopsis Sequence Match ( AT1G33750.1 )
(BLAST)

001: MEAARMGFRA KTLPHLGNGT RLPLKTKLSL FPMHLLQNHT TLSRRSTKLN LCVKACSKTS GVESSRPLPH SAPDLWGDHI LSVPTENSEF DTLETEIESI
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL

Arabidopsis Description

TPS22Terpenoid synthase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ27]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.