CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68962	Canola	cytosol	94.42	90.67
CDY70719	Canola	cytosol	54.34	75.57
CDX98661	Canola	cytosol	84.09	73.07
CDX95274	Canola	cytosol	14.05	51.13
CDY14934	Canola	cytosol	1.65	50.0
CDX76457	Canola	plastid	60.95	49.08
CDY18347	Canola	cytosol	16.74	48.8
AT4G20210.1	Thale cress	plastid	60.33	48.67
CDY71184	Canola	cytosol	32.44	47.01
CDY23121	Canola	cytosol	36.78	46.84
CDY49723	Canola	plastid	57.44	46.64
CDY41707	Canola	plastid	55.17	45.88
CDX98659	Canola	plastid	57.85	45.31
CDY54565	Canola	plastid	53.72	45.22
CDX76471	Canola	plastid	55.79	44.78
CDY09324	Canola	plastid	54.75	44.24
CDX74453	Canola	cytosol	48.35	44.07
CDX95273	Canola	plastid	38.02	43.91
CDY42473	Canola	cytosol	50.41	43.42
CDY14933	Canola	cytosol	42.77	42.42
CDY13053	Canola	extracellular	47.93	41.95
CDY63249	Canola	cytosol	48.14	41.91
CDY06577	Canola	cytosol	26.86	39.63
CDY67821	Canola	cytosol	15.29	38.14
PGSC0003DMT400050941	Potato	cytosol	19.42	37.6
CDX82478	Canola	cytosol	39.88	35.94
CDY39124	Canola	cytoskeleton, cytosol, plastid	41.12	35.6
PGSC0003DMT400070310	Potato	cytosol	22.31	34.73
CDX98470	Canola	plastid	41.74	34.59
CDY27296	Canola	cytosol	13.64	33.85
CDY02143	Canola	plastid	38.64	33.82
PGSC0003DMT400079785	Potato	cytosol	21.69	33.76
CDX87217	Canola	plastid	41.74	33.61
CDY09325	Canola	plastid	18.59	33.33
CDY39119	Canola	plastid	41.32	33.22
CDX75776	Canola	plastid	39.88	32.88
CDY32356	Canola	plastid	41.94	32.74
CDX82475	Canola	plastid	38.84	32.36
PGSC0003DMT400075074	Potato	cytosol	13.84	32.21
VIT_18s0001g04200.t01	Wine grape	cytosol	7.64	31.09
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	24.38	30.97
Solyc01g101220.1.1	Tomato	cytosol	10.33	29.76
Solyc01g101190.2.1	Tomato	cytosol	33.06	28.99
PGSC0003DMT400047124	Potato	cytosol	18.18	28.3
CDY15827	Canola	cytosol	8.88	27.74
CDX82477	Canola	plastid	16.94	27.33
CDY66920	Canola	cytosol	18.18	26.59
CDY01639	Canola	cytosol	10.54	26.42
CDY54750	Canola	cytosol	20.66	24.94
CDY62515	Canola	cytosol	20.45	24.69
CDX75775	Canola	plastid	24.38	24.38
GSMUA_Achr6P24330_001	Banana	cytosol	6.82	23.4
CDY53648	Canola	cytosol	12.19	23.05
CDY53129	Canola	cytosol	12.19	23.05
CDX76827	Canola	plastid	26.45	22.9
CDX90785	Canola	plastid	27.69	22.6
GSMUA_Achr6P24340_001	Banana	cytosol	6.82	22.15
CDY12909	Canola	cytosol	10.33	21.55
CDY68676	Canola	cytosol	16.74	21.54
CDY21487	Canola	plastid	25.83	21.01
CDX83558	Canola	plastid	25.21	20.71
CDX83208	Canola	plastid	25.41	20.67
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.22	20.65
CDY13587	Canola	plastid	24.79	20.37
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.54	20.32
VIT_18s0001g04510.t01	Wine grape	plastid	12.81	20.26
CDX83560	Canola	plastid	23.14	19.82
Os02t0458100-01	Rice	plastid	15.7	19.44
CDY13589	Canola	plastid	22.11	19.21
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	25.62	18.16
KRG93110	Soybean	mitochondrion	10.74	17.57
CDY68788	Canola	endoplasmic reticulum, golgi	14.67	16.9
CDY61957	Canola	plastid	12.81	16.4
VIT_18s0001g05430.t01	Wine grape	cytosol	15.91	15.98
CDY12910	Canola	plastid	3.93	12.75

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078JUG7	UniProt:A0A078JUG7	EnsemblPlants:CDY69236
ProteinID:CDY69236	ProteinID:CDY69236.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00084254001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF25	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EF15F7	SEG:seg	:	:

Description

BnaAnng29730DBnaAnng29730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUG7]

Coordinates

chrLK038924:-:1608..3892

Molecular Weight (calculated)

56479.3 Da

IEP (calculated)

6.972

GRAVY (calculated)

-0.235

Length

484 amino acids

Sequence
(BLAST)

001: MLMFSYHAEG HDYTKRKILL IYLMISLGIA YHFENEIEKT LAHAFQNIDD TIANEHDLYT ISIFFWVFRT YGYNMSADAF KRFKGDDGKF MDSLTKDAKG
101: MLSFFTTKHM DSLAGRSSSH LSRLKQNALG LSQHWNMEIL VAMEYISFYE QEKDHDETLL KFSKLNFKLL QLIYLKELKM VTKWYKELDF ASKLPPYFRD
201: RVVELHFFVI SMYFEPHFSS ARIMLTKFVT AEIIIDDTFD RYASMSESES LAKSLERWAP DKDMDKQPDY LKFVFKFILD VFKDFEREVG SEGRSYIVKS
301: TVEEFKILVK ANLDLAKWAQ IAHVPSFEDY MVVGELEVSW YASMAGTFMG MGHIAMKEAY EWLKSRPKLI QAISINGRLM NDMTGFEDDM SRGYVTNGIN
401: CYMKQYGVTK AEAYKELHKM RVHNDKIVNG ELLTTKDVPR RVLKQAINCA RMANVAYGYG EGLTHPEGKI KDYIVSLYLD LIRL

Best Arabidopsis Sequence Match ( AT3G29190.1 )
(BLAST)

001: MEVISIFGPK HGSLISLHSS YNLFKVSKVT RFRRTLFPSN HAKVFRFKAL TCDNQESNNM FKELPTSEWT HHFHSIQVDV SEMDAIRIEI DALKPKVKNI
101: LMSFQGIDST KKRILMIYML ISLGLACQFE EEIYETLKEG FGKIEEMMAN EEDLYTVSII FWVFRRYGHY ISSDFFRRFK GNDGNFKKSL IGDAKGMLSF
201: YEAANMATTK DYILDEALSF TSSHLESLAA NGACPPHMSR RIRNALNASQ HWNMEMLVAV EYISFYEKEK DHNEMLLKFS KLNFKFLQLQ YLQELKVLTK
301: WYKEVDFVSK LPPYFRDRIV ENHFFIQTLF VESQHSRARI MMAKYFILLV IQDDTLDRYA SLPEAESLVN SLNRWAPDHA MDKQPDYLKF VFKFILDTFE
401: EFEKELRPEG GSFGVCATIE EFKSLVKANL EAEKWALADN MPSFEEYIEV TGVGITAMTT LMGAMMCMGK IVPKEDYKWL KSRPKIIQAL AIKGRLMNDM
501: KGYKEDMSRG YAANAVTCYM KQYRVTEQEA LKEFEKMVAV ANKTVNEEFL TTMGVSRLVL KLAMGVGLMI SITYSEDEGY THPEGKIKEK MTTLFVDQIP
601: L

Arabidopsis Description

TPS15Terpenoid synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.