CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002968.1-P	Field mustard	plastid	92.17	39.64
VIT_18s0001g04200.t01	Wine grape	cytosol	26.51	36.97
CDY67821	Canola	cytosol	39.16	33.51
CDY01639	Canola	cytosol	36.75	31.61
CDY70719	Canola	cytosol	57.23	27.3
CDY09325	Canola	plastid	43.37	26.67
CDX82477	Canola	plastid	46.99	26.0
PGSC0003DMT400050941	Potato	cytosol	36.75	24.4
CDY42473	Canola	cytosol	81.33	24.02
CDY27296	Canola	cytosol	27.11	23.08
PGSC0003DMT400075074	Potato	cytosol	27.71	22.12
CDX95273	Canola	plastid	55.42	21.96
AT4G15870.1	Thale cress	plastid	72.89	20.23
CDY68962	Canola	cytosol	59.04	19.44
CDY14933	Canola	cytosol	56.63	19.26
CDX74453	Canola	cytosol	60.84	19.02
VIT_18s0001g04510.t01	Wine grape	plastid	34.34	18.63
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	34.34	18.39
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	27.71	18.33
CDY54565	Canola	plastid	62.65	18.09
CDY15827	Canola	cytosol	16.87	18.06
CDY63249	Canola	cytosol	57.83	17.27
CDX98661	Canola	cytosol	56.63	16.88
CDX76471	Canola	plastid	60.84	16.75
CDY69236	Canola	cytosol	48.8	16.74
Solyc01g101220.1.1	Tomato	cytosol	16.87	16.67
CDY09324	Canola	plastid	59.64	16.53
CDX98659	Canola	plastid	61.45	16.5
CDX76457	Canola	plastid	59.04	16.31
CDY49723	Canola	plastid	58.43	16.28
CDY41707	Canola	plastid	53.01	15.12
CDX75776	Canola	plastid	52.41	14.82
CDX82478	Canola	cytosol	47.59	14.71
CDY13053	Canola	extracellular	48.19	14.47
CDY39124	Canola	cytoskeleton, cytosol, plastid	45.18	13.42
CDY39119	Canola	plastid	47.59	13.12
CDY06577	Canola	cytosol	25.9	13.11
Os02t0458100-01	Rice	plastid	30.72	13.04
CDX82475	Canola	plastid	44.58	12.74
CDX87217	Canola	plastid	45.78	12.65
CDY23121	Canola	cytosol	28.92	12.63
PGSC0003DMT400047124	Potato	cytosol	23.49	12.54
VIT_18s0001g05430.t01	Wine grape	cytosol	35.54	12.24
CDY68676	Canola	cytosol	27.71	12.23
Solyc01g101190.2.1	Tomato	cytosol	40.36	12.14
CDY32356	Canola	plastid	43.37	11.61
CDX75775	Canola	plastid	33.73	11.57
CDY68788	Canola	endoplasmic reticulum, golgi	28.31	11.19
CDX98470	Canola	plastid	37.35	10.62
CDY02143	Canola	plastid	33.73	10.13
KRG93110	Soybean	mitochondrion	17.47	9.8
CDY61957	Canola	plastid	21.69	9.52
CDX83208	Canola	plastid	29.52	8.24
CDY21487	Canola	plastid	29.52	8.24
CDY12910	Canola	plastid	7.23	8.05
CDX90785	Canola	plastid	28.31	7.93
CDX83558	Canola	plastid	25.9	7.3
CDY13587	Canola	plastid	25.9	7.3
CDX83560	Canola	plastid	24.7	7.26
CDY62515	Canola	cytosol	17.47	7.23
CDY13589	Canola	plastid	24.1	7.18
CDY71184	Canola	cytosol	13.86	6.89
CDY54750	Canola	cytosol	16.27	6.73
CDX76827	Canola	plastid	22.29	6.62
CDY14934	Canola	cytosol	0.6	6.25
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	24.7	6.0
CDY12909	Canola	cytosol	7.83	5.6
CDY66920	Canola	cytosol	6.02	3.02
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	3.61	1.57
PGSC0003DMT400070310	Potato	cytosol	2.41	1.29
PGSC0003DMT400079785	Potato	cytosol	2.41	1.29
CDY53648	Canola	cytosol	0.6	0.39
CDY53129	Canola	cytosol	0.6	0.39
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0
CDX95274	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	GO:A0A078G032	UniProt:A0A078G032	EnsemblPlants:CDY18347
ProteinID:CDY18347	ProteinID:CDY18347.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00002943001	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EDDB8F	SEG:seg	:	:

Description

BnaC09g30970DBnaC09g30970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G032]

Coordinates

chrLK032084:+:699296..699991

Molecular Weight (calculated)

19345.1 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.255

Length

166 amino acids

Sequence
(BLAST)

001: MAKEGFGKIE DMLAGDNDLY TVSTIFWVFR TYGYNISSDV FERFKGGNGK FKECLIEDAK GMVSLYEAAH LRTTTDYILD EALSFTTIKL VSLAENGASS
101: SRISTRIRNA LCTPQHFNAE MVFTREYITF YEQEEYHNKM LLKFAKLNFK FLQLNWIQEL KTFTKW

Best Arabidopsis Sequence Match ( AT1G66020.2 )
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEVT NQTLLCNYD

Arabidopsis Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.