CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021560.1-P	Field mustard	plastid	99.83	99.83
CDY39124	Canola	cytoskeleton, cytosol, plastid	71.93	77.46
CDY32356	Canola	plastid	79.4	77.1
AT3G29410.1	Thale cress	plastid	71.1	70.98
CDX98470	Canola	plastid	61.79	63.7
CDX82477	Canola	plastid	31.06	62.33
CDX82478	Canola	cytosol	52.66	59.03
CDY02143	Canola	plastid	54.15	58.95
CDX87217	Canola	plastid	58.8	58.9
CDX75776	Canola	plastid	55.15	56.56
CDX82475	Canola	plastid	54.15	56.11
CDY06577	Canola	cytosol	28.57	52.44
CDY67821	Canola	cytosol	16.78	52.06
CDY27296	Canola	cytosol	16.28	50.26
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	30.9	48.82
CDX75775	Canola	plastid	38.54	47.93
CDY18347	Canola	cytosol	13.12	47.59
VIT_18s0001g04200.t01	Wine grape	cytosol	8.8	44.54
CDY14934	Canola	cytosol	1.16	43.75
CDY68962	Canola	cytosol	35.38	42.26
CDY69236	Canola	cytosol	33.22	41.32
PGSC0003DMT400050941	Potato	cytosol	17.11	41.2
CDX98661	Canola	cytosol	37.71	40.75
CDY70719	Canola	cytosol	23.42	40.52
CDX74453	Canola	cytosol	35.38	40.11
PGSC0003DMT400075074	Potato	cytosol	13.62	39.42
CDY14933	Canola	cytosol	31.4	38.73
CDY63249	Canola	cytosol	35.55	38.49
CDY41707	Canola	plastid	35.55	36.77
CDY71184	Canola	cytosol	20.27	36.53
CDY49723	Canola	plastid	35.88	36.24
CDX95274	Canola	cytosol	7.97	36.09
PGSC0003DMT400070310	Potato	cytosol	18.6	36.01
CDX76457	Canola	plastid	35.88	35.94
CDX95273	Canola	plastid	24.92	35.8
Solyc01g101220.1.1	Tomato	cytosol	9.8	35.12
CDX98659	Canola	plastid	35.88	34.95
CDY54565	Canola	plastid	33.06	34.61
Solyc01g101190.2.1	Tomato	cytosol	31.73	34.6
CDY09324	Canola	plastid	34.39	34.56
PGSC0003DMT400079785	Potato	cytosol	17.77	34.41
CDY01639	Canola	cytosol	10.96	34.2
CDY42473	Canola	cytosol	31.89	34.16
CDX76471	Canola	plastid	34.22	34.16
VIT_18s0001g04510.t01	Wine grape	plastid	17.28	33.99
PGSC0003DMT400047124	Potato	cytosol	17.44	33.76
CDY23121	Canola	cytosol	21.1	33.42
CDY13053	Canola	extracellular	30.56	33.27
CDY09325	Canola	plastid	14.78	32.96
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.45	31.94
Os02t0458100-01	Rice	plastid	17.94	27.62
CDY66920	Canola	cytosol	14.95	27.19
CDY54750	Canola	cytosol	17.94	26.93
CDY62515	Canola	cytosol	17.77	26.68
CDX90785	Canola	plastid	25.91	26.31
CDY53129	Canola	cytosol	10.96	25.78
CDY53648	Canola	cytosol	10.96	25.78
CDX76827	Canola	plastid	23.75	25.58
CDY68676	Canola	cytosol	15.95	25.53
CDY21487	Canola	plastid	24.75	25.04
CDX83208	Canola	plastid	24.42	24.71
CDY13587	Canola	plastid	23.92	24.45
CDX83558	Canola	plastid	23.92	24.45
CDY15827	Canola	cytosol	6.15	23.87
CDX83560	Canola	plastid	22.26	23.72
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.8	23.51
GSMUA_Achr6P24330_001	Banana	cytosol	5.48	23.4
GSMUA_Achr6P24340_001	Banana	cytosol	5.65	22.82
KRG93110	Soybean	mitochondrion	11.13	22.64
VIT_18s0001g05430.t01	Wine grape	cytosol	17.94	22.41
CDY13589	Canola	plastid	20.6	22.26
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	23.42	20.64
CDY68788	Canola	endoplasmic reticulum, golgi	14.29	20.48
CDY12909	Canola	cytosol	7.48	19.4
CDY12910	Canola	plastid	4.32	17.45
CDY61957	Canola	plastid	10.8	17.2

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078HP04	UniProt:A0A078HP04	EnsemblPlants:CDY39119
ProteinID:CDY39119	ProteinID:CDY39119.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00067287001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF22	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EE2E70	SEG:seg	:	:

Description

BnaA01g29370DBnaA01g29370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP04]

Coordinates

chrLK032440:-:288863..291630

Molecular Weight (calculated)

69731.0 Da

IEP (calculated)

6.353

GRAVY (calculated)

-0.307

Length

602 amino acids

Sequence
(BLAST)

001: MEALKMCFGL KTLPNVHNGP LCHKTNLSLI PRRLLQNNTP FSKKPTKHLS WVKTESSGDL ESTRPLTYFS PSTWGDYFLS VPVDDSEFEA LEQEIESVMK
101: PEVRDILMCP HNNNKEKIRI IHLLISLAIA HYFGSEIEEI LHQAFLKLDD LISEENDLET IAIMFEVFRL YGHKMSCDVF ERFKGEDGKF MESLVHDVRG
201: MLQLYEAAHL GLPSEDIMDN ALTFTRHHLG LLTGQETSPN LCKQIQRALY RSRYNNIEIV VARQYISFYD QEEGHDKTLL KFAKLNFNFC QMHYIKELKL
301: ITKWWKDLGM ASQLSYIRDR SVEIYFGMLG MFFEPRYSLG RIHTVKLTMV LTVVDDTCDA YATLPEVISL HDAFQRWDLG ATEELPSYMR IIYQSVLDTF
401: EYIDREMKAR GKFGTMKPII DDTKNLLRLY AKTAKWARAG HVPSFEDYME VGISTAGLHG LSAYGYISMD DCDQRQLNEW FNSKPKIFKA LNTAFRLRND
501: IATFEQEVGR GEVANGVNCY MKQHGVTKEE AVEVLSKMER ENYKILREEF VVSKDVPRQI LLRPVNIARV LDSYYKDGDG FSHPDQNLRD LVTSLFLRPI
601: PL

Best Arabidopsis Sequence Match ( AT3G29410.1 )
(BLAST)

001: MEASKCFGPR TLPIIHNVPL CLKTNFSLFP CRLLQSQSLS SKKSTKHYLF RVKAETSGDL ESTRPLTYFS PSYWGDHFLS VSIDDSEFEA LEKEIETVFK
101: PKVRDMLMSP HSSDKERIRL IHLLISLGIA YYYENEIEEI LHKAYGKLAC LISDEDDLET IAIMFEVFRL YGHKMPCDVF ERFKSEDGKF KESLVGDVRG
201: LLQLYEAAHL GAPSEDIMDE ALSFARYHLE PLAGTETSSN LFKHVENVLY RARYHSIEIL VARQYISFYD QEEDQDETLL RFSKLNFNFC QMHYVKELKI
301: VTRWWKELGI ASKLPYSIRE RNVETYLGGL GVLFEPRYSL ARIFLAKLTL IMTVVDDTCD AYATLPEVQS LHDAFHRWDL RAMEELPRYM RIIYQSVFET
401: VEDIDREMIA RGKHGRLQLT IDEIKSLMIW YLGIAKWARS DQVPSFEDYM EIGTPSSALD DFASYGFIAM DDCDQKQLKE WFYSKPKIFH ALNALFRIRN
501: DIVTFEQEMS RGEVANGVNC YMKQHGVTKE AAVEELRKME RESYKIMIEE FMTSKAMPRQ ILVRPVNIAR VMDLFYKEAD GFGHPDQKLL QLIASLFLHP
601: IPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.