Factsheet for Solyc01g101220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075074	Potato	cytosol	71.43	57.69
Solyc01g105940.2.1	Tomato	cytosol	25.6	40.95
Solyc10g005420.1.1	Tomato	cytosol	14.88	30.49
VIT_18s0001g04200.t01	Wine grape	cytosol	20.83	29.41
Solyc01g101190.2.1	Tomato	cytosol	81.55	24.82
CDY27296	Canola	cytosol	27.98	24.1
Solyc01g105850.2.1	Tomato	cytosol	36.31	21.94
CDY18347	Canola	cytosol	16.67	16.87
Bra027609.1-P	Field mustard	cytosol	27.98	16.32
Solyc01g105960.2.1	Tomato	cytosol	33.93	16.1
CDY70719	Canola	cytosol	32.74	15.8
Os02t0458100-01	Rice	plastid	32.74	14.07
Solyc05g026590.1.1	Tomato	cytosol	23.81	13.94
Bra012515.1-P	Field mustard	extracellular	19.05	12.96
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	23.81	12.9
CDY67821	Canola	cytosol	14.88	12.89
Bra020921.1-P	Field mustard	cytosol	30.95	12.84
VIT_18s0001g04510.t01	Wine grape	plastid	23.21	12.75
CDX95273	Canola	plastid	29.76	11.93
AT5G48110.1	Thale cress	plastid	23.81	11.8
CDY06577	Canola	cytosol	22.62	11.59
Bra012513.1-P	Field mustard	cytosol	32.14	11.37
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	39.88	11.36
Solyc01g105920.2.1	Tomato	plastid	39.29	11.15
Solyc01g105900.2.1	Tomato	plastid	35.12	11.03
Bra021566.1-P	Field mustard	plastid	33.33	11.02
Solyc01g105890.2.1	Tomato	plastid	39.88	11.0
CDY68962	Canola	cytosol	32.14	10.71
Solyc01g105870.2.1	Tomato	plastid	38.69	10.71
Solyc02g079840.1.1	Tomato	cytosol	33.93	10.59
Bra035927.1-P	Field mustard	mitochondrion, plastid	35.12	10.39
CDY39124	Canola	cytoskeleton, cytosol, plastid	34.52	10.38
VIT_18s0001g05430.t01	Wine grape	cytosol	29.76	10.37
CDX75775	Canola	plastid	29.76	10.33
CDY69236	Canola	cytosol	29.76	10.33
CDX82478	Canola	cytosol	32.74	10.24
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	33.93	10.2
CDY71184	Canola	cytosol	19.64	9.88
CDX98661	Canola	cytosol	32.74	9.87
CDX87217	Canola	plastid	35.12	9.82
Bra021560.1-P	Field mustard	plastid	35.12	9.8
CDY39119	Canola	plastid	35.12	9.8
Bra012955.1-P	Field mustard	plastid	34.52	9.68
AT3G29410.1	Thale cress	plastid	34.52	9.62
CDX76471	Canola	plastid	34.52	9.62
CDX75776	Canola	plastid	33.33	9.54
CDY14933	Canola	cytosol	27.38	9.43
CDX82475	Canola	plastid	32.14	9.29
Bra001557.1-P	Field mustard	plastid	33.33	9.27
AT1G48820.1	Thale cress	mitochondrion, plastid	30.95	9.27
CDX74453	Canola	cytosol	29.17	9.23
AT1G70080.1	Thale cress	mitochondrion	33.33	9.17
AT5G44630.1	Thale cress	cytosol	30.36	9.16
AT3G14540.1	Thale cress	plastid	32.74	9.14
Bra021564.1-P	Field mustard	plastid	32.74	9.12
AT3G14520.1	Thale cress	plastid	32.74	9.09
Bra001555.1-P	Field mustard	plastid	32.74	9.05
CDY09324	Canola	plastid	32.14	9.02
CDX82477	Canola	plastid	16.07	9.0
CDY09325	Canola	plastid	14.29	8.89
Solyc10g005390.2.1	Tomato	cytosol	29.76	8.88
CDY54565	Canola	plastid	30.36	8.87
Bra020953.1-P	Field mustard	plastid	32.14	8.85
AT4G13300.1	Thale cress	cytosol	29.17	8.84
AT3G29190.1	Thale cress	plastid	31.55	8.82
Bra027931.1-P	Field mustard	plastid	31.55	8.82
CDX76457	Canola	plastid	31.55	8.82
CDX98470	Canola	plastid	30.36	8.73
AT4G15870.1	Thale cress	plastid	30.95	8.7
CDY23121	Canola	cytosol	19.64	8.68
CDY02143	Canola	plastid	28.57	8.68
CDY13053	Canola	extracellular	28.57	8.68
AT4G13280.2	Thale cress	cytosol	28.57	8.66
AT3G14490.1	Thale cress	plastid	30.95	8.65
Bra028251.1-P	Field mustard	cytosol	28.57	8.62
AT4G20200.1	Thale cress	plastid	30.95	8.61
AT4G20230.2	Thale cress	plastid	31.55	8.56
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	30.95	8.55
CDY32356	Canola	plastid	31.55	8.55
AT2G23230.2	Thale cress	plastid	30.95	8.51
AT4G20210.1	Thale cress	plastid	30.36	8.5
KRG93110	Soybean	mitochondrion	14.88	8.45
Bra039519.1-P	Field mustard	cytosol	27.98	8.44
CDY41707	Canola	plastid	29.17	8.42
Solyc02g079890.1.1	Tomato	cytosol, plastid	27.38	8.41
AT3G29110.1	Thale cress	plastid	29.76	8.4
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	19.05	8.4
AT1G66020.1	Thale cress	plastid	29.76	8.36
Bra002165.1-P	Field mustard	cytosol	26.79	8.09
CDY63249	Canola	cytosol	26.79	8.09
Bra002968.1-P	Field mustard	plastid	18.45	8.03
AT3G32030.1	Thale cress	plastid	28.57	7.95
CDX98659	Canola	plastid	29.17	7.93
AT1G33750.1	Thale cress	mitochondrion, plastid	27.98	7.79
CDY49723	Canola	plastid	27.38	7.72
Bra002714.1-P	Field mustard	plastid	26.79	7.64
Solyc10g005410.2.1	Tomato	plastid	28.57	7.63
AT1G48800.1	Thale cress	mitochondrion, plastid	27.38	7.63
Solyc03g007730.1.1	Tomato	cytosol	25.0	7.47
CDY42473	Canola	cytosol	23.81	7.12
CDY01639	Canola	cytosol	7.74	6.74
Solyc01g105950.2.1	Tomato	extracellular	1.79	1.97
GSMUA_Achr6P24330_001	Banana	cytosol	1.19	1.42
Solyc01g105860.2.1	Tomato	cytosol	1.79	1.38
GSMUA_Achr6P24340_001	Banana	cytosol	1.19	1.34
CDX95274	Canola	cytosol	0.0	0.0
CDY14934	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4B1F0	PFAM:PF03936	PANTHER:PTHR44946	SUPFAM:SSF48576
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g101220.1	EnsemblPlants:Solyc01g101220.1.1	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	UniParc:UPI0002767A86
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:91038585..91039629

Molecular Weight (calculated)

19674.5 Da

IEP (calculated)

5.500

GRAVY (calculated)

-0.204

Length

168 amino acids

Sequence
(BLAST)

001: MHLQIAQEYG SIEASHGEDR HLLSLLLILS LQVTHALEQS LHKSIPRVET HYFISSIYEE EEFKNDVLRF AKLDFNLLQM LHKQELSEVS RDRAVECYFW
101: TMGVYAEPQY SQAHVMLAKT IAMISIVDDT FDAYGIVKEL EFYTDAIQRY GLLLEQFNLS RSSNKWHK

Best Arabidopsis Sequence Match ( AT5G23960.2 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE YSICNIIPIP DSMKFIYNVT VEFYDKLDEE LEKEGRSGCG FHLKKSLQKT ANGYMQEAKW LKKDYIATFD EYKENAILSS
401: GYYALIAMTF VRMTDVAKLD AFEWLSSHPK IRVASEIISR FTDDISSYEF EHKREHVATG IDCYMQQFGV SKERAVEVMG NIVSDAWKDL NQELMRPHVF
501: PFPLLMRVLN LSRVIDVFYR YQDAYTNPKL LKEHIVSLLI ETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.